Project measure / variable:   Schoenrock1   LD_dist_lt_VDD

ID, description, units MPD:61245   LD_dist_lt_VDD   distance traveled in light side, 10 min test   [cm]  vitamin D-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - distance traveled in light side, 10 min test vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means645   cm
Median of the strain means600   cm
SD of the strain means± 397
Coefficient of variation (CV)0.616
Min–max range of strain means104   –   1636   cm
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 29295355.9989 1953023.7333 18.4954 < 0.0001
Residuals 160 16895210.1942 105595.0637


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 491.0 293.0   20 65.5 0.596 7.6, 1011.0 -0.39
RIX:CC(003 x 014) f 837.0 308.0   9 103.0 0.368 409.0, 1512.0 0.48
RIX:CC(004 x 017) f 1636.0 461.0   12 133.0 0.282 838.0, 2527.0 2.5
RIX:CC(006 x 026) f 611.0 120.0   9 40.0 0.197 475.0, 833.0 -0.08
RIX:CC(011 x 001) f 512.0 232.0   11 69.8 0.452 73.7, 898.0 -0.33
RIX:CC(014 x 003) f 452.0 232.0   6 94.6 0.513 123.0, 785.0 -0.48
RIX:CC(017 x 004) f 1338.0 412.0   11 124.0 0.308 548.0, 1997.0 1.75
RIX:CC(023 x 047) f 328.0 296.0   8 105.0 0.9 12.0, 874.0 -0.8
RIX:CC(026 x 006) f 695.0 611.0   14 163.0 0.879 0.13
RIX:CC(032 x 042) f 785.0 248.0   19 56.9 0.316 344.0, 1425.0 0.35
RIX:CC(035 x 062) f 589.0 233.0   5 104.0 0.396 236.0, 889.0 -0.14
RIX:CC(041 x 051) f 144.0 143.0   20 31.9 0.991 -1.26
RIX:CC(042 x 032) f 803.0 461.0   6 188.0 0.574 82.4, 1510.0 0.4
RIX:CC(047 x 023) f 341.0 365.0   6 149.0 1.07 -0.76
RIX:CC(051 x 041) f 104.0 153.0   14 40.8 1.46 -1.36
RIX:CC(062 x 035) f 647.0 265.0   6 108.0 0.409 341.0, 1056.0 0.01


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 491.3 72.6619 634.8001 347.7999
RIX:CC(003 x 014) f 836.9222 108.318 1050.8396 623.0049
RIX:CC(004 x 017) f 1635.9167 93.8061 1821.1745 1450.6588
RIX:CC(006 x 026) f 610.6778 108.318 824.5951 396.7604
RIX:CC(011 x 001) f 511.9455 97.9773 705.441 318.4499
RIX:CC(014 x 003) f 451.9 132.6619 713.8942 189.9058
RIX:CC(017 x 004) f 1337.7182 97.9773 1531.2137 1144.2227
RIX:CC(023 x 047) f 328.4875 114.8886 555.3811 101.5939
RIX:CC(026 x 006) f 694.8786 86.8476 866.394 523.3631
RIX:CC(032 x 042) f 785.3368 74.5495 932.5649 638.1088
RIX:CC(035 x 062) f 588.64 145.3238 875.6402 301.6398
RIX:CC(041 x 051) f 143.95 72.6619 287.4501 0.4499
RIX:CC(042 x 032) f 802.9167 132.6619 1064.9108 540.9225
RIX:CC(047 x 023) f 341.4333 132.6619 603.4275 79.4392
RIX:CC(051 x 041) f 104.4071 86.8476 275.9226 0.0
RIX:CC(062 x 035) f 646.9667 132.6619 908.9608 384.9725




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA