Phenotype measure:   Schoenrock1   LD_dist_dk_PD

ID, description, units MPD:61239   LD_dist_dk_PD   distance traveled in dark side, 10 min test   [cm]  protein-deficient diet
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
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Ontology mappings

  STRAIN COMPARISON PLOT
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Schoenrock1 - distance traveled in dark side, 10 min test protein-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means1407   cm
Median of the strain means1350   cm
SD of the strain means± 458
Coefficient of variation (CV)0.325
Min–max range of strain means529   –   2434   cm
Mean sample size per strain8.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 38104438.5636 2540295.9042 5.6753 < 0.0001
Residuals 140 62664795.0508 447605.6789


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 1212.0 197.0   19 45.3 0.163 784.0, 1725.0 -0.43
RIX:CC(003 x 014) f 1522.0 1064.0   4 532.0 0.699 231.0, 2584.0 0.25
RIX:CC(004 x 017) f 2219.0 347.0   12 100.0 0.157 1906.0, 3121.0 1.77
RIX:CC(005 x 040) f 1427.0 405.0   14 108.0 0.283 633.0, 2162.0 0.04
RIX:CC(006 x 026) f 1452.0 217.0   6 88.5 0.149 1223.0, 1781.0 0.1
RIX:CC(011 x 001) f 1820.0 1568.0   12 453.0 0.861 1166.0, 6778.0 0.9
RIX:CC(014 x 003) f 1785.0 0.0   1   0.0 0.0 1785.0, 1785.0 0.83
RIX:CC(017 x 004) f 2434.0 765.0   9 255.0 0.314 1249.0, 3380.0 2.24
RIX:CC(023 x 047) f 1274.0 308.0   10 97.5 0.242 605.0, 1600.0 -0.29
RIX:CC(026 x 006) f 1327.0 252.0   6 103.0 0.19 817.0, 1467.0 -0.17
RIX:CC(032 x 042) f 1104.0 257.0   7 96.9 0.232 910.0, 1477.0 -0.66
RIX:CC(035 x 062) f 1447.0 0.0   1   0.0 0.0 1447.0, 1447.0 0.09
RIX:CC(040 x 005) f 1035.0 642.0   16 161.0 0.621 -0.81
RIX:CC(041 x 051) f 751.0 837.0   12 242.0 1.11 -1.43
RIX:CC(042 x 032) f 1305.0 68.1   6 27.8 0.0522 1202.0, 1392.0 -0.22
RIX:CC(047 x 023) f 1304.0 173.0   6 70.8 0.133 1095.0, 1544.0 -0.22
RIX:CC(051 x 041) f 529.0 773.0   13 215.0 1.46 -1.92
RIX:CC(062 x 035) f 1374.0 337.0   4 169.0 0.245 908.0, 1651.0 -0.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 1212.4842 153.4868 1515.9358 909.0326
RIX:CC(003 x 014) f 1521.7 334.5167 2183.0575 860.3425
RIX:CC(004 x 017) f 2218.8333 193.1333 2600.6683 1836.9984
RIX:CC(005 x 040) f 1427.3571 178.8067 1780.8676 1073.8467
RIX:CC(006 x 026) f 1452.4 273.1317 1992.3961 912.4039
RIX:CC(011 x 001) f 1820.4917 193.1333 2202.3266 1438.6567
RIX:CC(017 x 004) f 2434.3556 223.0111 2875.2605 1993.4506
RIX:CC(023 x 047) f 1274.5 211.5669 1692.7792 856.2208
RIX:CC(026 x 006) f 1326.9833 273.1317 1866.9795 786.9872
RIX:CC(032 x 042) f 1104.0857 252.8709 1604.025 604.1465
RIX:CC(040 x 005) f 1034.6688 167.2583 1365.3475 703.99
RIX:CC(041 x 051) f 750.5667 193.1333 1132.4016 368.7317
RIX:CC(042 x 032) f 1305.0667 273.1317 1845.0628 765.0705
RIX:CC(047 x 023) f 1304.05 273.1317 1844.0461 764.0539
RIX:CC(051 x 041) f 528.6154 185.5565 895.4705 161.7603
RIX:CC(062 x 035) f 1374.35 334.5167 2035.7075 712.9925




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA