Project measure / variable:   Schoenrock1   LD_trans_VDD

ID, description, units MPD:61237   LD_trans_VDD   number of transitions between light and dark sides, 10 min test   [n]  vitamin D-deficient diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - number of transitions between light and dark sides, 10 min test vitamin D-deficient diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means72.0   n
Median of the strain means69.7   n
SD of the strain means± 39.3
Coefficient of variation (CV)0.546
Min–max range of strain means11.1   –   162   n
Mean sample size per strain10.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 302192.9312 20146.1954 18.7933 < 0.0001
Residuals 160 171518.3813 1071.9899


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 48.7 22.0   20 4.92 0.452 8.0, 96.0 -0.59
RIX:CC(003 x 014) f 75.8 21.1   9 7.04 0.279 36.0, 102.0 0.1
RIX:CC(004 x 017) f 162.0 92.8   12 26.8 0.572 96.0, 443.0 2.29
RIX:CC(006 x 026) f 91.2 9.2   9 3.07 0.101 73.0, 102.0 0.49
RIX:CC(011 x 001) f 45.3 22.8   11 6.88 0.504 2.0, 76.0 -0.68
RIX:CC(014 x 003) f 53.2 21.0   6 8.56 0.394 24.0, 78.0 -0.48
RIX:CC(017 x 004) f 124.0 29.1   11 8.78 0.234 70.0, 169.0 1.32
RIX:CC(023 x 047) f 58.5 27.9   8 9.87 0.477 23.0, 105.0 -0.34
RIX:CC(026 x 006) f 90.0 34.8   14 9.3 0.387 1.0, 134.0 0.46
RIX:CC(032 x 042) f 96.6 24.4   19 5.61 0.253 65.0, 149.0 0.63
RIX:CC(035 x 062) f 64.0 10.4   5 4.64 0.162 46.0, 72.0 -0.2
RIX:CC(041 x 051) f 11.1 12.9   20 2.88 1.17 1.0, 49.0 -1.55
RIX:CC(042 x 032) f 104.0 23.0   6 9.4 0.22 69.0, 132.0 0.81
RIX:CC(047 x 023) f 37.2 31.0   6 12.7 0.835 2.0, 87.0 -0.88
RIX:CC(051 x 041) f 14.9 10.0   14 2.67 0.674 3.0, 35.0 -1.45
RIX:CC(062 x 035) f 75.3 24.8   6 10.1 0.329 48.0, 102.0 0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 48.7 7.3212 63.1586 34.2414
RIX:CC(003 x 014) f 75.7778 10.9138 97.3314 54.2242
RIX:CC(004 x 017) f 162.1667 9.4516 180.8326 143.5007
RIX:CC(006 x 026) f 91.2222 10.9138 112.7758 69.6686
RIX:CC(011 x 001) f 45.2727 9.8719 64.7687 25.7768
RIX:CC(014 x 003) f 53.1667 13.3666 79.5643 26.769
RIX:CC(017 x 004) f 124.1818 9.8719 143.6778 104.6859
RIX:CC(023 x 047) f 58.5 11.5758 81.361 35.639
RIX:CC(026 x 006) f 90.0 8.7505 107.2813 72.7187
RIX:CC(032 x 042) f 96.6316 7.5114 111.4658 81.7974
RIX:CC(035 x 062) f 64.0 14.6423 92.9172 35.0828
RIX:CC(041 x 051) f 11.05 7.3212 25.5086 0.0
RIX:CC(042 x 032) f 104.5 13.3666 130.8976 78.1024
RIX:CC(047 x 023) f 37.1667 13.3666 63.5643 10.769
RIX:CC(051 x 041) f 14.8571 8.7505 32.1385 0.0
RIX:CC(062 x 035) f 75.3333 13.3666 101.731 48.9357




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA