Project measure / variable:   Schoenrock1   LD_trans_ME

ID, description, units MPD:61236   LD_trans_ME   number of transitions between light and dark sides, 10 min test   [n]  methyl-enriched diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - number of transitions between light and dark sides, 10 min test methyl-enriched diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means73.1   n
Median of the strain means78.7   n
SD of the strain means± 38.8
Coefficient of variation (CV)0.530
Min–max range of strain means10.4   –   162   n
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 233762.3933 13750.729 16.2118 < 0.0001
Residuals 158 134014.4647 848.1928


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 49.9 16.7   12 4.82 0.334 9.0, 73.0 -0.6
RIX:CC(003 x 014) f 58.7 49.2   3 28.4 0.839 2.0, 91.0 -0.37
RIX:CC(004 x 017) f 131.0 23.4   6 9.55 0.178 90.0, 154.0 1.49
RIX:CC(005 x 040) f 103.0 41.6   24 8.5 0.405 3.0, 187.0 0.77
RIX:CC(006 x 026) f 88.4 23.2   5 10.4 0.262 59.0, 116.0 0.39
RIX:CC(011 x 001) f 42.1 18.5   14 4.94 0.44 2.0, 84.0 -0.8
RIX:CC(014 x 003) f 55.8 41.1   4 20.6 0.737 2.0, 101.0 -0.45
RIX:CC(017 x 004) f 162.0 36.8   2   26.0 0.227 136.0, 188.0 2.29
RIX:CC(023 x 047) f 44.6 27.3   9 9.11 0.614 3.0, 87.0 -0.74
RIX:CC(026 x 006) f 78.4 27.2   5 12.2 0.347 42.0, 117.0 0.14
RIX:CC(032 x 042) f 90.0 20.7   19 4.76 0.23 57.0, 129.0 0.44
RIX:CC(035 x 062) f 79.0 8.49   2   6.0 0.107 73.0, 85.0 0.15
RIX:CC(040 x 005) f 81.8 40.1   15 10.3 0.49 1.0, 143.0 0.22
RIX:CC(041 x 051) f 12.4 14.3   24 2.93 1.16 1.0, 48.0 -1.57
RIX:CC(042 x 032) f 92.4 29.6   9 9.85 0.32 50.0, 135.0 0.5
RIX:CC(047 x 023) f 37.2 31.6   4 15.8 0.849 14.0, 81.0 -0.93
RIX:CC(051 x 041) f 10.4 6.2   12 1.79 0.595 2.0, 23.0 -1.62
RIX:CC(062 x 035) f 99.0 51.8   7 19.6 0.523 54.0, 202.0 0.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 49.9167 8.4073 66.5219 33.3115
RIX:CC(003 x 014) f 58.6667 16.8146 91.8771 25.4563
RIX:CC(004 x 017) f 131.3333 11.8897 154.8166 107.85
RIX:CC(005 x 040) f 102.6667 5.9449 114.4083 90.925
RIX:CC(006 x 026) f 88.4 13.0245 114.1247 62.6753
RIX:CC(011 x 001) f 42.0714 7.7836 57.4449 26.698
RIX:CC(014 x 003) f 55.75 14.5619 84.511 26.989
RIX:CC(017 x 004) f 162.0 20.5936 202.6743 121.3257
RIX:CC(023 x 047) f 44.5556 9.7079 63.7296 25.3815
RIX:CC(026 x 006) f 78.4 13.0245 104.1247 52.6753
RIX:CC(032 x 042) f 90.0 6.6814 103.1965 76.8035
RIX:CC(035 x 062) f 79.0 20.5936 119.6743 38.3257
RIX:CC(040 x 005) f 81.8 7.5197 96.6521 66.9479
RIX:CC(041 x 051) f 12.375 5.9449 24.1166 0.6334
RIX:CC(042 x 032) f 92.4444 9.7079 111.6185 73.2704
RIX:CC(047 x 023) f 37.25 14.5619 66.011 8.489
RIX:CC(051 x 041) f 10.4167 8.4073 27.0219 0.0
RIX:CC(062 x 035) f 99.0 11.0077 120.7413 77.2587




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA