Project measure / variable:   Schoenrock1   LD_trans_STD

ID, description, units MPD:61234   LD_trans_STD   number of transitions between light and dark sides, 10 min test   [n]  standard diet  
various diets study
Data set, strains Schoenrock1   CC RIX   16 strains     sex: f     age: 8-9wks
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  STRAIN COMPARISON PLOT
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Schoenrock1 - number of transitions between light and dark sides, 10 min test standard diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested16 strains
Mean of the strain means74.3   n
Median of the strain means73.9   n
SD of the strain means± 38.6
Coefficient of variation (CV)0.519
Min–max range of strain means11.0   –   166   n
Mean sample size per strain10.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 15 288812.1866 19254.1458 19.3105 < 0.0001
Residuals 154 153550.9664 997.0842


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 41.3 27.0   11 8.15 0.655 2.0, 87.0 -0.86
RIX:CC(003 x 014) f 81.8 20.6   13 5.72 0.252 49.0, 117.0 0.19
RIX:CC(004 x 017) f 166.0 70.4   12 20.3 0.425 88.0, 368.0 2.38
RIX:CC(006 x 026) f 74.2 15.1   10 4.79 0.204 45.0, 95.0 0.0
RIX:CC(011 x 001) f 52.2 15.2   17 3.69 0.291 19.0, 76.0 -0.57
RIX:CC(014 x 003) f 59.9 34.8   8 12.3 0.582 15.0, 128.0 -0.37
RIX:CC(017 x 004) f 137.0 42.6   15 11.0 0.31 64.0, 202.0 1.62
RIX:CC(023 x 047) f 63.8 31.8   4 15.9 0.498 42.0, 110.0 -0.27
RIX:CC(026 x 006) f 77.0 36.3   11 10.9 0.471 8.0, 153.0 0.07
RIX:CC(032 x 042) f 89.3 32.6   21 7.12 0.365 19.0, 158.0 0.39
RIX:CC(035 x 062) f 73.6 9.58   5 4.28 0.13 57.0, 81.0 -0.02
RIX:CC(041 x 051) f 11.0 10.1   11 3.04 0.915 1.0, 37.0 -1.64
RIX:CC(042 x 032) f 85.4 21.3   9 7.09 0.249 50.0, 126.0 0.29
RIX:CC(047 x 023) f 72.3 18.3   3 10.6 0.254 58.0, 93.0 -0.05
RIX:CC(051 x 041) f 15.8 14.8   16 3.69 0.935 1.0, 54.0 -1.52
RIX:CC(062 x 035) f 89.0 13.3   4 6.65 0.149 72.0, 103.0 0.38


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 41.2727 9.5207 60.0808 22.4647
RIX:CC(003 x 014) f 81.7692 8.7578 99.0701 64.4683
RIX:CC(004 x 017) f 165.8333 9.1154 183.8407 147.826
RIX:CC(006 x 026) f 74.2 9.9854 93.9261 54.4739
RIX:CC(011 x 001) f 52.2353 7.6585 67.3645 37.1061
RIX:CC(014 x 003) f 59.875 11.164 81.9294 37.8206
RIX:CC(017 x 004) f 137.3333 8.1531 153.4396 121.2271
RIX:CC(023 x 047) f 63.75 15.7883 94.9396 32.5604
RIX:CC(026 x 006) f 77.0 9.5207 95.8081 58.1919
RIX:CC(032 x 042) f 89.3333 6.8906 102.9456 75.7211
RIX:CC(035 x 062) f 73.6 14.1215 101.4969 45.7031
RIX:CC(041 x 051) f 11.0 9.5207 29.8081 0.0
RIX:CC(042 x 032) f 85.4444 10.5255 106.2375 64.6514
RIX:CC(047 x 023) f 72.3333 18.2308 108.348 36.3186
RIX:CC(051 x 041) f 15.8125 7.8942 31.4073 0.2177
RIX:CC(062 x 035) f 89.0 15.7883 120.1896 57.8104




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA