Project measure / variable:   Schoenrock1   OF_boli_ME

ID, description, units MPD:61216   OF_boli_ME   number of fecal boli, 10 min test   [g]  methyl-enriched diet  
various diets study
Data set, strains Schoenrock1   CC RIX   18 strains     sex: f     age: 8-9wks
Procedure open field test
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  STRAIN COMPARISON PLOT
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Schoenrock1 - number of fecal boli, 10 min test methyl-enriched diet



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested18 strains
Mean of the strain means3.71   g
Median of the strain means3.55   g
SD of the strain means± 1.10
Coefficient of variation (CV)0.297
Min–max range of strain means2.40   –   6.25   g
Mean sample size per strain9.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 17 138.0607 8.1212 1.8462 0.0266
Residuals 159 699.4082 4.3988


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
RIX:CC(001 x 011) f 4.54 1.61   13 0.447 0.355 2.0, 8.0 0.76
RIX:CC(003 x 014) f 2.67 0.577   3 0.333 0.217 2.0, 3.0 -0.94
RIX:CC(004 x 017) f 3.17 1.94   6 0.792 0.613 1.0, 6.0 -0.49
RIX:CC(005 x 040) f 3.04 2.1   24 0.428 0.689 -0.6
RIX:CC(006 x 026) f 2.4 1.67   5 0.748 0.697 1.0, 5.0 -1.19
RIX:CC(011 x 001) f 4.57 2.59   14 0.693 0.567 1.0, 10.0 0.79
RIX:CC(014 x 003) f 2.5 0.577   4 0.289 0.231 2.0, 3.0 -1.1
RIX:CC(017 x 004) f 3.5 0.707   2   0.5 0.202 3.0, 4.0 -0.19
RIX:CC(023 x 047) f 6.11 1.45   9 0.484 0.238 4.0, 8.0 2.19
RIX:CC(026 x 006) f 3.6 1.82   5 0.812 0.505 2.0, 6.0 -0.1
RIX:CC(032 x 042) f 3.74 2.05   19 0.47 0.549 0.03
RIX:CC(035 x 062) f 3.0 2.83   2   2.0 0.943 1.0, 5.0 -0.64
RIX:CC(040 x 005) f 4.0 2.78   15 0.717 0.694 0.27
RIX:CC(041 x 051) f 3.92 2.24   24 0.458 0.573 0.2
RIX:CC(042 x 032) f 3.22 1.92   9 0.641 0.597 -0.44
RIX:CC(047 x 023) f 6.25 1.26   4 0.629 0.201 5.0, 8.0 2.31
RIX:CC(051 x 041) f 3.75 2.53   12 0.73 0.674 0.04
RIX:CC(062 x 035) f 2.71 0.951   7 0.36 0.35 1.0, 4.0 -0.9


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
RIX:CC(001 x 011) f 4.5385 0.5817 5.6873 3.3896
RIX:CC(003 x 014) f 2.6667 1.2109 5.0582 0.2752
RIX:CC(004 x 017) f 3.1667 0.8562 4.8577 1.4756
RIX:CC(005 x 040) f 3.0417 0.4281 3.8872 2.1961
RIX:CC(006 x 026) f 2.4 0.938 4.2525 0.5475
RIX:CC(011 x 001) f 4.5714 0.5605 5.6785 3.4644
RIX:CC(014 x 003) f 2.5 1.0487 4.5711 0.4289
RIX:CC(017 x 004) f 3.5 1.483 6.429 0.571
RIX:CC(023 x 047) f 6.1111 0.6991 7.4919 4.7304
RIX:CC(026 x 006) f 3.6 0.938 5.4525 1.7475
RIX:CC(032 x 042) f 3.7368 0.4812 4.6871 2.7866
RIX:CC(035 x 062) f 3.0 1.483 5.929 0.071
RIX:CC(040 x 005) f 4.0 0.5415 5.0695 2.9305
RIX:CC(041 x 051) f 3.9167 0.4281 4.7622 3.0711
RIX:CC(042 x 032) f 3.2222 0.6991 4.603 1.8415
RIX:CC(047 x 023) f 6.25 1.0487 8.3211 4.1789
RIX:CC(051 x 041) f 3.75 0.6054 4.9458 2.5542
RIX:CC(062 x 035) f 2.7143 0.7927 4.2799 1.1487




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA