Project measure / variable:   Tordoff1   NH4Cl_bwavg

ID, description, units MPD:6121   NH4Cl_bwavg   average body weight during NH4Cl test (local parameter)   [g]  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Tordoff1 - average body weight during NH4Cl test (local parameter)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means27.3   g
Median of the strain means27.8   g
SD of the strain means± 4.89
Coefficient of variation (CV)0.179
Min–max range of strain means15.4   –   37.6   g
Mean sample size per strain11.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 6971.939 258.22 72.7223 < 0.0001
Residuals 294 1043.9252 3.5508


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 24.4 2.11   12 0.61 0.0865 21.9, 27.8 -0.6
A/J m 24.6 1.78   12 0.513 0.0723 21.8, 27.7 -0.55
AKR/J m 33.9 2.25   12 0.649 0.0664 30.8, 37.1 1.35
BALB/cByJ m 30.4 1.87   12 0.541 0.0617 27.7, 33.0 0.63
BUB/BnJ m 31.9 2.68   7 1.01 0.084 27.8, 34.2 0.94
C3H/HeJ m 26.2 1.53   12 0.441 0.0582 23.4, 29.4 -0.23
C57BL/6J m 27.4 2.03   12 0.586 0.0742 24.7, 32.1 0.02
C57L/J m 28.0 2.01   11 0.607 0.0718 24.4, 31.1 0.14
CAST/EiJ m 15.9 1.21   12 0.35 0.0762 14.7, 19.3 -2.33
CBA/J m 29.2 1.69   12 0.487 0.0577 26.2, 31.4 0.39
CE/J m 30.4 2.56   12 0.739 0.0843 27.8, 36.6 0.63
DBA/2J m 27.9 1.9   12 0.548 0.0681 24.0, 30.7 0.12
FVB/NJ m 27.7 1.61   12 0.466 0.0582 25.4, 30.9 0.08
I/LnJ m 25.4 1.45   11 0.438 0.0572 22.7, 26.7 -0.39
KK/HlJ m 37.6 2.64   6 1.08 0.0702 33.2, 40.6 2.1
LP/J m 25.6 1.97   12 0.568 0.077 23.1, 29.6 -0.35
NOD/ShiLtJ m 30.5 2.03   12 0.585 0.0664 27.4, 34.6 0.65
NZB/BlNJ m 32.3 1.67   12 0.483 0.0518 30.4, 36.2 1.02
P/J m 27.0 2.02   12 0.584 0.0749 23.5, 29.5 -0.06
PL/J m 22.8 1.63   12 0.47 0.0714 20.6, 26.2 -0.92
RBF/DnJ m 30.4 1.55   12 0.447 0.051 28.7, 33.5 0.63
RF/J m 32.2 2.23   12 0.644 0.0692 30.1, 37.2 1.0
RIIIS/J m 21.2 2.25   12 0.648 0.106 15.6, 24.6 -1.25
SEA/GnJ m 30.2 1.45   12 0.418 0.0481 27.6, 32.2 0.59
SJL/J m 28.1 1.67   11 0.504 0.0594 25.3, 30.0 0.16
SM/J m 23.5 1.84   12 0.53 0.0781 21.0, 26.5 -0.78
SPRET/EiJ m 15.4 1.16   12 0.336 0.0756 13.4, 17.4 -2.44
SWR/J m 24.7 1.78   12 0.515 0.0722 22.0, 27.3 -0.53


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 24.425 0.544 25.4956 23.3544
A/J m 24.5667 0.544 25.6372 23.4961
AKR/J m 33.8667 0.544 34.9372 32.7961
BALB/cByJ m 30.3583 0.544 31.4289 29.2878
BUB/BnJ m 31.9 0.7122 33.3017 30.4983
C3H/HeJ m 26.2333 0.544 27.3039 25.1628
C57BL/6J m 27.375 0.544 28.4456 26.3044
C57L/J m 28.0091 0.5682 29.1273 26.8909
CAST/EiJ m 15.9333 0.544 17.0039 14.8628
CBA/J m 29.225 0.544 30.2956 28.1544
CE/J m 30.3583 0.544 31.4289 29.2878
DBA/2J m 27.8583 0.544 28.9289 26.7878
FVB/NJ m 27.7417 0.544 28.8122 26.6711
I/LnJ m 25.4182 0.5682 26.5363 24.3
KK/HlJ m 37.65 0.7693 39.164 36.136
LP/J m 25.5583 0.544 26.6289 24.4878
NOD/ShiLtJ m 30.5417 0.544 31.6122 29.4711
NZB/BlNJ m 32.275 0.544 33.3456 31.2044
P/J m 26.9917 0.544 28.0622 25.9211
PL/J m 22.8083 0.544 23.8789 21.7378
RBF/DnJ m 30.35 0.544 31.4206 29.2794
RF/J m 32.2417 0.544 33.3122 31.1711
RIIIS/J m 21.2083 0.544 22.2789 20.1378
SEA/GnJ m 30.15 0.544 31.2206 29.0794
SJL/J m 28.1455 0.5682 29.2636 27.0273
SM/J m 23.5083 0.544 24.5789 22.4378
SPRET/EiJ m 15.4 0.544 16.4706 14.3294
SWR/J m 24.7 0.544 25.7706 23.6294




  GWAS USING LINEAR MIXED MODELS