Project measure / variable:   Tordoff1   CaCl2_pref30

ID, description, units MPD:6118   CaCl2_pref30   preference for CaCl2 (calcium chloride) solutions   [%]  concentration 30 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for CaCl2 (calcium chloride) solutions concentration 30 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means23.6   %
Median of the strain means21.1   %
SD of the strain means± 16.6
Coefficient of variation (CV)0.703
Min–max range of strain means3.92   –   56.8   %
Mean sample size per strain11.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 83295.9805 3085.0363 12.5006 < 0.0001
Residuals 293 72309.5849 246.7904


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 48.5 8.31   12 2.4 0.171 33.3, 66.1 1.5
A/J m 38.5 17.8   12 5.13 0.462 10.2, 65.5 0.89
AKR/J m 4.52 3.13   12 0.904 0.692 0.7, 9.7 -1.15
BALB/cByJ m 25.8 25.6   12 7.4 0.992 2.9, 85.7 0.13
BUB/BnJ m 49.2 16.1   7 6.09 0.328 25.3, 66.7 1.54
C3H/HeJ m 56.8 12.4   12 3.58 0.218 45.3, 91.8 1.99
C57BL/6J m 20.1 14.8   12 4.28 0.738 3.5, 44.4 -0.21
C57L/J m 23.8 11.8   11 3.56 0.497 9.1, 46.9 0.01
CAST/EiJ m 25.4 17.0   12 4.9 0.669 3.0, 53.5 0.11
CBA/J m 44.2 27.9   12 8.04 0.63 3.9, 90.1 1.24
CE/J m 4.12 2.89   12 0.835 0.703 0.7, 10.7 -1.17
DBA/2J m 50.3 27.4   12 7.9 0.544 2.6, 98.4 1.6
FVB/NJ m 11.6 7.4   12 2.14 0.639 3.8, 27.9 -0.72
I/LnJ m 6.79 3.66   11 1.1 0.539 3.3, 13.8 -1.01
KK/HlJ m 3.92 1.03   6 0.421 0.263 2.9, 5.8 -1.19
LP/J m 41.3 27.0   12 7.79 0.652 3.6, 91.5 1.06
NOD/ShiLtJ m 17.4 13.9   12 4.01 0.799 1.3, 36.4 -0.38
NZB/BlNJ m 37.0 10.1   12 2.93 0.274 22.7, 55.6 0.8
P/J m 6.27 7.74   12 2.23 1.23 1.7, 30.6 -1.04
PL/J m 38.3 17.1   12 4.94 0.447 6.7, 61.1 0.88
RBF/DnJ m 14.4 12.7   12 3.67 0.882 4.0, 52.1 -0.56
RF/J m 15.3 14.6   12 4.22 0.953 4.7, 56.3 -0.5
RIIIS/J m 22.0 23.1   12 6.66 1.05 2.9, 80.8 -0.1
SEA/GnJ m 9.35 9.87   12 2.85 1.06 2.5, 31.4 -0.86
SJL/J m 11.8 8.52   11 2.57 0.722 3.6, 28.6 -0.71
SM/J m 22.7 22.1   12 6.38 0.975 3.1, 81.6 -0.06
SPRET/EiJ m 5.29 2.21   11 0.665 0.417 2.0, 9.1 -1.1
SWR/J m 7.24 7.27   12 2.1 1.0 1.8, 27.3 -0.99


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 48.5417 4.535 57.4669 39.6164
A/J m 38.4833 4.535 47.4086 29.5581
AKR/J m 4.525 4.535 13.4502 0.0
BALB/cByJ m 25.8333 4.535 34.7586 16.9081
BUB/BnJ m 49.1571 5.9377 60.843 37.4713
C3H/HeJ m 56.8333 4.535 65.7586 47.9081
C57BL/6J m 20.075 4.535 29.0002 11.1498
C57L/J m 23.7636 4.7366 33.0857 14.4415
CAST/EiJ m 25.3833 4.535 34.3086 16.4581
CBA/J m 44.2167 4.535 53.1419 35.2914
CE/J m 4.1167 4.535 13.0419 0.0
DBA/2J m 50.3333 4.535 59.2586 41.4081
FVB/NJ m 11.5833 4.535 20.5086 2.6581
I/LnJ m 6.7909 4.7366 16.113 0.0
KK/HlJ m 3.9167 6.4134 16.5388 0.0
LP/J m 41.35 4.535 50.2752 32.4248
NOD/ShiLtJ m 17.3917 4.535 26.3169 8.4664
NZB/BlNJ m 37.0167 4.535 45.9419 28.0914
P/J m 6.275 4.535 15.2002 0.0
PL/J m 38.3167 4.535 47.2419 29.3914
RBF/DnJ m 14.4083 4.535 23.3336 5.4831
RF/J m 15.3417 4.535 24.2669 6.4164
RIIIS/J m 21.9917 4.535 30.9169 13.0664
SEA/GnJ m 9.35 4.535 18.2752 0.4248
SJL/J m 11.8 4.7366 21.1221 2.4779
SM/J m 22.6833 4.535 31.6086 13.7581
SPRET/EiJ m 5.2909 4.7366 14.613 0.0
SWR/J m 7.2417 4.535 16.1669 0.0




  GWAS USING LINEAR MIXED MODELS