Project measure / variable:   Tordoff1   CaCl2_age

ID, description, units MPD:6114   CaCl2_age   age at start of CaCl2 test (local parameter)   [d]  
Data set, strains Tordoff1   inbred   28 strains     sex: m
Procedure colony observation
Ontology mappings


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  STRAIN COMPARISON PLOT
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Tordoff1 - age at start of CaCl2 test (local parameter)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means82.4   d
Median of the strain means85.0   d
SD of the strain means± 7.22
Coefficient of variation (CV)0.0875
Min–max range of strain means65.2   –   99.0   d
Mean sample size per strain11.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 15180.4414 562.2386 20.3558 < 0.0001
Residuals 296 8175.6667 27.6205


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
A/J m 92.0 0.0   12 0.0 0.0 92.0, 92.0 1.32
AKR/J m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
BALB/cByJ m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
BUB/BnJ m 66.0 10.6   7 4.0 0.16 48.0, 76.0 -2.28
C3H/HeJ m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
C57BL/6J m 83.0 0.0   12 0.0 0.0 83.0, 83.0 0.08
C57L/J m 83.0 0.0   12 0.0 0.0 83.0, 83.0 0.08
CAST/EiJ m 76.6 9.18   12 2.65 0.12 62.0, 83.0 -0.81
CBA/J m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
CE/J m 74.5 10.5   12 3.04 0.141 62.0, 90.0 -1.1
DBA/2J m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
FVB/NJ m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
I/LnJ m 76.0 5.97   12 1.72 0.0785 69.0, 83.0 -0.89
KK/HlJ m 90.0 0.0   6 0.0 0.0 90.0, 90.0 1.05
LP/J m 85.6 5.55   12 1.6 0.0649 78.0, 92.0 0.44
NOD/ShiLtJ m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
NZB/BlNJ m 83.0 0.0   12 0.0 0.0 83.0, 83.0 0.08
P/J m 83.2 7.39   12 2.13 0.0887 71.0, 92.0 0.1
PL/J m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
RBF/DnJ m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
RF/J m 71.0 11.9   12 3.45 0.168 50.0, 85.0 -1.59
RIIIS/J m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35
SEA/GnJ m 99.0 10.3   12 2.98 0.104 85.0, 106.0 2.29
SJL/J m 85.0 0.0   11 0.0 0.0 85.0, 85.0 0.35
SM/J m 75.4 8.68   12 2.51 0.115 62.0, 83.0 -0.98
SPRET/EiJ m 65.2 6.41   12 1.85 0.0983 57.0, 71.0 -2.39
SWR/J m 85.0 0.0   12 0.0 0.0 85.0, 85.0 0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 85.0 1.5171 87.9857 82.0143
A/J m 92.0 1.5171 94.9857 89.0143
AKR/J m 85.0 1.5171 87.9857 82.0143
BALB/cByJ m 85.0 1.5171 87.9857 82.0143
BUB/BnJ m 66.0 1.9864 69.9093 62.0907
C3H/HeJ m 85.0 1.5171 87.9857 82.0143
C57BL/6J m 83.0 1.5171 85.9857 80.0143
C57L/J m 83.0 1.5171 85.9857 80.0143
CAST/EiJ m 76.5833 1.5171 79.5691 73.5976
CBA/J m 85.0 1.5171 87.9857 82.0143
CE/J m 74.5 1.5171 77.4857 71.5143
DBA/2J m 85.0 1.5171 87.9857 82.0143
FVB/NJ m 85.0 1.5171 87.9857 82.0143
I/LnJ m 76.0 1.5171 78.9857 73.0143
KK/HlJ m 90.0 2.1456 94.2225 85.7775
LP/J m 85.5833 1.5171 88.5691 82.5976
NOD/ShiLtJ m 85.0 1.5171 87.9857 82.0143
NZB/BlNJ m 83.0 1.5171 85.9857 80.0143
P/J m 83.25 1.5171 86.2357 80.2643
PL/J m 85.0 1.5171 87.9857 82.0143
RBF/DnJ m 85.0 1.5171 87.9857 82.0143
RF/J m 71.0 1.5171 73.9857 68.0143
RIIIS/J m 85.0 1.5171 87.9857 82.0143
SEA/GnJ m 99.0 1.5171 101.9857 96.0143
SJL/J m 85.0 1.5846 88.1185 81.8815
SM/J m 75.4167 1.5171 78.4024 72.4309
SPRET/EiJ m 65.1667 1.5171 68.1524 62.1809
SWR/J m 85.0 1.5171 87.9857 82.0143




  GWAS USING LINEAR MIXED MODELS