Project measure / variable:   Tordoff1   KCl_pref300

ID, description, units MPD:6113   KCl_pref300   preference for KCl (potassium chloride) solutions   [%]  concentration 300 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for KCl (potassium chloride) solutions concentration 300 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means8.66   %
Median of the strain means7.00   %
SD of the strain means± 6.82
Coefficient of variation (CV)0.787
Min–max range of strain means2.75   –   38.5   %
Mean sample size per strain11.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 14651.2137 542.6375 14.6467 < 0.0001
Residuals 292 10818.1111 37.0483


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 12.8 8.77   12 2.53 0.684 3.8, 29.5 0.61
A/J m 7.4 5.4   12 1.56 0.729 2.4, 21.6 -0.19
AKR/J m 5.26 4.69   12 1.35 0.892 1.6, 18.3 -0.5
BALB/cByJ m 4.79 3.07   12 0.885 0.64 1.7, 12.6 -0.57
BUB/BnJ m 3.94 2.67   7 1.01 0.676 1.5, 9.2 -0.69
C3H/HeJ m 5.42 1.86   12 0.537 0.343 2.6, 8.9 -0.48
C57BL/6J m 38.5 13.5   12 3.89 0.35 11.7, 56.3 4.38
C57L/J m 16.4 4.0   11 1.21 0.243 10.7, 26.1 1.13
CAST/EiJ m 10.3 3.79   12 1.1 0.368 4.5, 17.8 0.24
CBA/J m 4.51 1.67   12 0.483 0.371 1.9, 7.7 -0.61
CE/J m 4.51 2.69   12 0.776 0.596 1.5, 10.4 -0.61
DBA/2J m 7.09 6.21   10 1.96 0.876 1.8, 19.7 -0.23
FVB/NJ m 6.03 3.91   12 1.13 0.648 2.5, 15.1 -0.39
I/LnJ m 5.22 2.89   11 0.872 0.554 2.0, 12.3 -0.5
KK/HlJ m 2.78 0.731   6 0.298 0.262 2.2, 4.0 -0.86
LP/J m 7.57 9.05   12 2.61 1.2 1.9, 34.9 -0.16
NOD/ShiLtJ m 13.1 8.43   12 2.43 0.642 3.3, 32.2 0.65
NZB/BlNJ m 12.6 4.15   12 1.2 0.329 5.5, 18.2 0.58
P/J m 2.75 1.26   12 0.363 0.457 -0.87
PL/J m 10.2 5.42   12 1.57 0.532 4.2, 20.8 0.23
RBF/DnJ m 10.8 5.54   12 1.6 0.514 4.1, 21.4 0.31
RF/J m 6.92 3.72   12 1.07 0.538 1.4, 13.7 -0.26
RIIIS/J m 9.25 6.23   12 1.8 0.673 3.7, 25.0 0.09
SEA/GnJ m 5.65 4.23   12 1.22 0.748 2.4, 16.7 -0.44
SJL/J m 11.5 10.9   11 3.3 0.95 1.7, 38.5 0.42
SM/J m 4.26 2.51   12 0.726 0.59 2.5, 11.7 -0.65
SPRET/EiJ m 8.31 11.5   12 3.33 1.39 2.1, 44.4 -0.05
SWR/J m 4.69 3.62   12 1.04 0.771 2.1, 15.5 -0.58


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 12.8167 1.7571 16.2748 9.3585
A/J m 7.4 1.7571 10.8582 3.9418
AKR/J m 5.2583 1.7571 8.7165 1.8002
BALB/cByJ m 4.7917 1.7571 8.2498 1.3335
BUB/BnJ m 3.9429 2.3006 8.4707 0.0
C3H/HeJ m 5.425 1.7571 8.8832 1.9668
C57BL/6J m 38.4833 1.7571 41.9415 35.0252
C57L/J m 16.4455 1.8352 20.0574 12.8335
CAST/EiJ m 10.3167 1.7571 13.7748 6.8585
CBA/J m 4.5083 1.7571 7.9665 1.0502
CE/J m 4.5083 1.7571 7.9665 1.0502
DBA/2J m 7.09 1.9248 10.8782 3.3018
FVB/NJ m 6.0333 1.7571 9.4915 2.5752
I/LnJ m 5.2182 1.8352 8.8301 1.6062
KK/HlJ m 2.7833 2.4849 7.6739 0.0
LP/J m 7.5667 1.7571 11.0248 4.1085
NOD/ShiLtJ m 13.1167 1.7571 16.5748 9.6585
NZB/BlNJ m 12.6167 1.7571 16.0748 9.1585
P/J m 2.75 1.7571 6.2082 0.0
PL/J m 10.2 1.7571 13.6582 6.7418
RBF/DnJ m 10.7667 1.7571 14.2248 7.3085
RF/J m 6.9167 1.7571 10.3748 3.4585
RIIIS/J m 9.25 1.7571 12.7082 5.7918
SEA/GnJ m 5.65 1.7571 9.1082 2.1918
SJL/J m 11.5182 1.8352 15.1301 7.9062
SM/J m 4.2583 1.7571 7.7165 0.8002
SPRET/EiJ m 8.3083 1.7571 11.7665 4.8502
SWR/J m 4.6917 1.7571 8.1498 1.2335




  GWAS USING LINEAR MIXED MODELS