Project measure / variable:   Tordoff1   KCl_pref200

ID, description, units MPD:6112   KCl_pref200   preference for KCl (potassium chloride) solutions   [%]  concentration 200 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for KCl (potassium chloride) solutions concentration 200 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means24.5   %
Median of the strain means23.3   %
SD of the strain means± 11.5
Coefficient of variation (CV)0.471
Min–max range of strain means9.27   –   54.2   %
Mean sample size per strain11.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 41073.8864 1521.2551 7.4868 < 0.0001
Residuals 292 59332.1891 203.1924


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 42.7 17.2   12 4.97 0.403 14.0, 74.3 1.58
A/J m 29.0 14.3   12 4.14 0.495 5.8, 49.1 0.39
AKR/J m 10.8 10.5   12 3.02 0.965 1.5, 35.3 -1.19
BALB/cByJ m 12.9 6.91   11 2.08 0.538 4.8, 27.1 -1.0
BUB/BnJ m 9.27 5.95   7 2.25 0.642 4.1, 19.7 -1.32
C3H/HeJ m 12.0 5.07   12 1.46 0.422 4.4, 19.3 -1.08
C57BL/6J m 54.2 15.7   12 4.55 0.29 27.5, 84.0 2.58
C57L/J m 31.8 8.52   10 2.69 0.268 22.8, 50.7 0.63
CAST/EiJ m 27.2 16.7   12 4.81 0.613 5.3, 61.2 0.24
CBA/J m 13.3 6.38   12 1.84 0.48 3.5, 25.0 -0.97
CE/J m 22.9 16.4   12 4.74 0.718 4.1, 46.1 -0.14
DBA/2J m 30.1 10.6   12 3.07 0.354 10.0, 48.1 0.49
FVB/NJ m 14.7 6.07   12 1.75 0.412 4.3, 22.5 -0.85
I/LnJ m 13.1 6.47   11 1.95 0.494 5.2, 27.7 -0.99
KK/HlJ m 15.6 5.29   6 2.16 0.34 7.9, 22.0 -0.77
LP/J m 20.2 16.5   12 4.77 0.819 4.2, 60.0 -0.37
NOD/ShiLtJ m 34.8 13.2   12 3.81 0.38 16.9, 65.6 0.89
NZB/BlNJ m 39.0 8.12   12 2.34 0.208 24.0, 48.2 1.26
P/J m 10.2 10.2   12 2.95 1.0 1.6, 32.3 -1.24
PL/J m 38.0 16.6   12 4.79 0.437 15.6, 65.2 1.17
RBF/DnJ m 34.0 18.2   12 5.26 0.536 9.4, 78.9 0.83
RF/J m 20.2 15.3   12 4.4 0.755 3.5, 60.0 -0.37
RIIIS/J m 28.7 19.9   12 5.74 0.691 11.1, 82.2 0.37
SEA/GnJ m 13.1 9.8   12 2.83 0.748 2.4, 36.4 -0.99
SJL/J m 23.7 9.8   11 2.95 0.413 7.7, 44.7 -0.07
SM/J m 36.3 31.2   12 9.01 0.861 9.8, 99.2 1.02
SPRET/EiJ m 22.1 18.0   12 5.19 0.812 1.9, 57.4 -0.21
SWR/J m 25.5 16.2   12 4.68 0.636 4.0, 54.8 0.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 42.7083 4.1149 50.807 34.6096
A/J m 28.9667 4.1149 37.0654 20.868
AKR/J m 10.8417 4.1149 18.9404 2.743
BALB/cByJ m 12.8636 4.2979 21.3224 4.4048
BUB/BnJ m 9.2714 5.3877 19.8751 0.0
C3H/HeJ m 12.0167 4.1149 20.1154 3.918
C57BL/6J m 54.2333 4.1149 62.332 46.1346
C57L/J m 31.79 4.5077 40.6617 22.9183
CAST/EiJ m 27.1583 4.1149 35.257 19.0596
CBA/J m 13.2833 4.1149 21.382 5.1846
CE/J m 22.875 4.1149 30.9737 14.7763
DBA/2J m 30.0583 4.1149 38.157 21.9596
FVB/NJ m 14.725 4.1149 22.8237 6.6263
I/LnJ m 13.1091 4.2979 21.5679 4.6503
KK/HlJ m 15.55 5.8194 27.0033 4.0967
LP/J m 20.1833 4.1149 28.282 12.0846
NOD/ShiLtJ m 34.7833 4.1149 42.882 26.6846
NZB/BlNJ m 39.0083 4.1149 47.107 30.9096
P/J m 10.2167 4.1149 18.3154 2.118
PL/J m 38.025 4.1149 46.1237 29.9263
RBF/DnJ m 34.0 4.1149 42.0987 25.9013
RF/J m 20.1917 4.1149 28.2904 12.093
RIIIS/J m 28.7333 4.1149 36.832 20.6346
SEA/GnJ m 13.0917 4.1149 21.1904 4.993
SJL/J m 23.7364 4.2979 32.1952 15.2776
SM/J m 36.2833 4.1149 44.382 28.1846
SPRET/EiJ m 22.125 4.1149 30.2237 14.0263
SWR/J m 25.4833 4.1149 33.582 17.3846




  GWAS USING LINEAR MIXED MODELS