Project measure / variable:   Tordoff1   KCl_pref30

ID, description, units MPD:6110   KCl_pref30   preference for KCl (potassium chloride) solutions   [%]  concentration 30 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for KCl (potassium chloride) solutions concentration 30 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means48.7   %
Median of the strain means48.8   %
SD of the strain means± 5.09
Coefficient of variation (CV)0.104
Min–max range of strain means40.4   –   60.2   %
Mean sample size per strain11.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 7934.817 293.8821 1.0695 0.3758
Residuals 290 79685.1036 274.7762


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 52.2 10.2   12 2.95 0.196 30.8, 69.8 0.68
A/J m 47.1 22.0   12 6.36 0.468 4.0, 87.8 -0.32
AKR/J m 43.4 23.0   11 6.95 0.531 8.3, 80.7 -1.04
BALB/cByJ m 50.1 14.7   12 4.24 0.294 26.8, 76.6 0.27
BUB/BnJ m 52.1 11.0   7 4.17 0.212 35.4, 70.4 0.67
C3H/HeJ m 41.7 15.4   12 4.45 0.37 21.8, 73.3 -1.38
C57BL/6J m 47.1 10.2   12 2.95 0.216 32.8, 71.9 -0.32
C57L/J m 42.1 7.84   11 2.36 0.186 29.5, 57.1 -1.3
CAST/EiJ m 55.7 18.4   12 5.32 0.331 9.5, 80.7 1.37
CBA/J m 47.0 20.7   12 5.97 0.44 6.5, 66.7 -0.34
CE/J m 49.1 25.0   12 7.21 0.509 2.8, 95.2 0.08
DBA/2J m 51.9 15.3   12 4.41 0.295 28.4, 82.3 0.63
FVB/NJ m 42.1 17.3   12 4.99 0.411 13.0, 70.3 -1.3
I/LnJ m 40.4 7.74   11 2.33 0.191 26.6, 51.1 -1.63
KK/HlJ m 44.4 8.02   6 3.27 0.181 32.2, 55.2 -0.85
LP/J m 45.0 17.1   11 5.15 0.379 5.0, 70.2 -0.73
NOD/ShiLtJ m 45.5 14.7   11 4.43 0.323 18.2, 76.9 -0.63
NZB/BlNJ m 43.5 12.7   12 3.66 0.292 17.2, 61.8 -1.02
P/J m 50.2 12.3   12 3.56 0.245 25.0, 68.5 0.29
PL/J m 52.4 15.1   12 4.35 0.287 25.9, 82.4 0.72
RBF/DnJ m 57.8 14.2   11 4.27 0.245 38.2, 78.9 1.78
RF/J m 53.8 13.6   12 3.94 0.254 29.0, 71.4 1.0
RIIIS/J m 60.2 18.5   12 5.34 0.307 40.5, 94.4 2.26
SEA/GnJ m 48.4 12.5   12 3.6 0.258 13.5, 65.4 -0.06
SJL/J m 54.4 9.71   11 2.93 0.179 37.8, 70.7 1.12
SM/J m 51.3 25.9   12 7.47 0.504 21.4, 95.9 0.51
SPRET/EiJ m 46.0 25.9   12 7.47 0.562 2.1, 97.2 -0.53
SWR/J m 49.1 13.8   12 3.97 0.28 31.4, 78.8 0.08


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 52.1667 4.7852 61.5848 42.7486
A/J m 47.0583 4.7852 56.4764 37.6402
AKR/J m 43.3545 4.998 53.1914 33.5177
BALB/cByJ m 50.1 4.7852 59.5181 40.6819
BUB/BnJ m 52.0857 6.2653 64.4169 39.7545
C3H/HeJ m 41.6917 4.7852 51.1098 32.2736
C57BL/6J m 47.15 4.7852 56.5681 37.7319
C57L/J m 42.0545 4.998 51.8914 32.2177
CAST/EiJ m 55.6667 4.7852 65.0848 46.2486
CBA/J m 47.0167 4.7852 56.4348 37.5986
CE/J m 49.125 4.7852 58.5431 39.7069
DBA/2J m 51.925 4.7852 61.3431 42.5069
FVB/NJ m 42.1333 4.7852 51.5514 32.7152
I/LnJ m 40.4273 4.998 50.2642 30.5904
KK/HlJ m 44.4 6.7673 57.7192 31.0808
LP/J m 45.0091 4.998 54.846 35.1722
NOD/ShiLtJ m 45.5182 4.998 55.3551 35.6813
NZB/BlNJ m 43.5 4.7852 52.9181 34.0819
P/J m 50.2417 4.7852 59.6598 40.8236
PL/J m 52.4333 4.7852 61.8514 43.0152
RBF/DnJ m 57.7818 4.998 67.6187 47.9449
RF/J m 53.7833 4.7852 63.2014 44.3652
RIIIS/J m 60.225 4.7852 69.6431 50.8069
SEA/GnJ m 48.4417 4.7852 57.8598 39.0236
SJL/J m 54.3727 4.998 64.2096 44.5358
SM/J m 51.275 4.7852 60.6931 41.8569
SPRET/EiJ m 46.0417 4.7852 55.4598 36.6236
SWR/J m 49.1083 4.7852 58.5264 39.6902




  GWAS USING LINEAR MIXED MODELS