Project measure / variable:   Tordoff1   NaCl_pref450

ID, description, units MPD:6106   NaCl_pref450   preference for NaCl (sodium chloride) solutions   [%]  concentration 450 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for NaCl (sodium chloride) solutions concentration 450 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means11.9   %
Median of the strain means10.1   %
SD of the strain means± 6.41
Coefficient of variation (CV)0.538
Min–max range of strain means4.94   –   27.1   %
Mean sample size per strain11.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 12600.3725 466.6805 15.8036 < 0.0001
Residuals 294 8681.8378 29.5301


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 15.0 9.02   11 2.72 0.601 2.9, 28.6 0.48
A/J m 7.38 2.92   12 0.844 0.396 4.0, 13.2 -0.71
AKR/J m 4.94 2.08   12 0.6 0.42 2.0, 9.5 -1.09
BALB/cByJ m 12.3 4.72   12 1.36 0.384 5.8, 21.6 0.06
BUB/BnJ m 7.26 3.69   7 1.4 0.509 3.0, 12.7 -0.73
C3H/HeJ m 6.51 2.87   12 0.829 0.441 3.8, 13.0 -0.84
C57BL/6J m 18.2 8.24   12 2.38 0.453 9.4, 34.1 0.98
C57L/J m 21.9 6.51   11 1.96 0.298 8.7, 30.9 1.56
CAST/EiJ m 12.3 3.71   12 1.07 0.303 7.4, 18.8 0.06
CBA/J m 6.86 8.24   12 2.38 1.2 3.4, 32.9 -0.79
CE/J m 8.72 4.14   12 1.2 0.475 2.7, 17.6 -0.5
DBA/2J m 7.56 3.42   12 0.987 0.453 3.3, 15.6 -0.68
FVB/NJ m 14.5 7.58   12 2.19 0.524 5.4, 25.4 0.4
I/LnJ m 6.3 1.92   12 0.555 0.305 3.6, 10.5 -0.88
KK/HlJ m 5.22 2.86   6 1.17 0.548 1.8, 9.1 -1.04
LP/J m 7.15 4.25   12 1.23 0.595 3.2, 18.3 -0.74
NOD/ShiLtJ m 11.5 6.97   12 2.01 0.606 2.6, 19.7 -0.07
NZB/BlNJ m 27.1 6.65   12 1.92 0.245 14.6, 37.2 2.37
P/J m 5.72 3.42   12 0.987 0.598 1.6, 11.9 -0.97
PL/J m 18.7 6.72   12 1.94 0.359 9.6, 31.6 1.06
RBF/DnJ m 17.4 7.29   12 2.1 0.418 6.8, 26.9 0.85
RF/J m 16.0 4.92   12 1.42 0.308 6.0, 21.6 0.64
RIIIS/J m 15.9 7.25   12 2.09 0.456 7.7, 28.9 0.62
SEA/GnJ m 6.85 4.36   12 1.26 0.636 1.3, 14.5 -0.79
SJL/J m 27.0 5.13   11 1.55 0.19 19.7, 35.3 2.35
SM/J m 6.33 3.53   12 1.02 0.558 1.8, 11.4 -0.87
SPRET/EiJ m 7.57 2.9   12 0.836 0.383 4.0, 12.0 -0.68
SWR/J m 11.6 4.59   12 1.32 0.395 5.7, 19.8 -0.05


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 15.0091 1.6385 18.2337 11.7845
A/J m 7.375 1.5687 10.4623 4.2877
AKR/J m 4.9417 1.5687 8.029 1.8544
BALB/cByJ m 12.2917 1.5687 15.379 9.2044
BUB/BnJ m 7.2571 2.0539 11.2994 3.2149
C3H/HeJ m 6.5083 1.5687 9.5956 3.421
C57BL/6J m 18.1917 1.5687 21.279 15.1044
C57L/J m 21.8545 1.6385 25.0791 18.6299
CAST/EiJ m 12.2667 1.5687 15.354 9.1794
CBA/J m 6.8583 1.5687 9.9456 3.771
CE/J m 8.7167 1.5687 11.804 5.6294
DBA/2J m 7.5583 1.5687 10.6456 4.471
FVB/NJ m 14.475 1.5687 17.5623 11.3877
I/LnJ m 6.3 1.5687 9.3873 3.2127
KK/HlJ m 5.2167 2.2185 9.5828 0.8505
LP/J m 7.15 1.5687 10.2373 4.0627
NOD/ShiLtJ m 11.5083 1.5687 14.5956 8.421
NZB/BlNJ m 27.1167 1.5687 30.204 24.0294
P/J m 5.7167 1.5687 8.804 2.6294
PL/J m 18.7 1.5687 21.7873 15.6127
RBF/DnJ m 17.4333 1.5687 20.5206 14.346
RF/J m 15.9583 1.5687 19.0456 12.871
RIIIS/J m 15.925 1.5687 19.0123 12.8377
SEA/GnJ m 6.85 1.5687 9.9373 3.7627
SJL/J m 26.9727 1.6385 30.1973 23.7481
SM/J m 6.3333 1.5687 9.4206 3.246
SPRET/EiJ m 7.5667 1.5687 10.654 4.4794
SWR/J m 11.6167 1.5687 14.704 8.5294




  GWAS USING LINEAR MIXED MODELS