Project measure / variable:   Tordoff1   NaCl_pref300

ID, description, units MPD:6105   NaCl_pref300   preference for NaCl (sodium chloride) solutions   [%]  concentration 300 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for NaCl (sodium chloride) solutions concentration 300 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means25.5   %
Median of the strain means25.6   %
SD of the strain means± 11.2
Coefficient of variation (CV)0.442
Min–max range of strain means6.72   –   49.2   %
Mean sample size per strain11.5   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 38965.2734 1443.1583 13.2108 < 0.0001
Residuals 288 31461.3163 109.2407


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 32.6 18.8   11 5.66 0.576 7.1, 70.8 0.63
A/J m 25.2 18.3   11 5.52 0.727 7.0, 57.4 -0.02
AKR/J m 9.55 7.38   12 2.13 0.773 4.1, 31.0 -1.41
BALB/cByJ m 21.6 10.9   12 3.13 0.502 7.8, 37.7 -0.34
BUB/BnJ m 30.6 9.06   7 3.42 0.296 14.8, 40.6 0.46
C3H/HeJ m 10.1 9.13   12 2.64 0.901 1.7, 36.2 -1.37
C57BL/6J m 27.9 11.4   11 3.45 0.41 11.5, 46.3 0.22
C57L/J m 40.3 8.14   11 2.45 0.202 26.7, 50.8 1.32
CAST/EiJ m 37.0 4.88   10 1.54 0.132 30.8, 44.8 1.03
CBA/J m 6.72 3.42   12 0.987 0.509 1.7, 12.7 -1.67
CE/J m 22.8 11.4   12 3.29 0.501 2.9, 43.7 -0.24
DBA/2J m 26.0 8.64   12 2.49 0.332 12.7, 38.0 0.05
FVB/NJ m 36.4 6.39   12 1.84 0.176 24.5, 50.0 0.97
I/LnJ m 16.9 9.79   12 2.83 0.58 6.7, 42.3 -0.76
KK/HlJ m 12.6 4.1   6 1.67 0.324 5.9, 15.8 -1.14
LP/J m 15.9 10.3   12 2.98 0.648 4.9, 38.5 -0.85
NOD/ShiLtJ m 23.8 7.71   11 2.32 0.324 15.2, 38.4 -0.15
NZB/BlNJ m 49.2 7.99   12 2.31 0.162 33.7, 59.4 2.11
P/J m 11.5 9.2   12 2.66 0.802 3.1, 34.5 -1.24
PL/J m 35.3 13.6   12 3.92 0.384 14.3, 55.0 0.87
RBF/DnJ m 30.2 14.6   11 4.41 0.486 9.2, 54.5 0.42
RF/J m 35.5 10.3   12 2.97 0.29 17.3, 50.5 0.89
RIIIS/J m 33.3 12.8   12 3.68 0.383 12.5, 50.0 0.7
SEA/GnJ m 13.9 9.34   12 2.7 0.674 2.5, 31.4 -1.03
SJL/J m 43.3 6.31   11 1.9 0.146 37.1, 58.1 1.59
SM/J m 18.8 11.5   12 3.31 0.61 2.7, 38.0 -0.59
SPRET/EiJ m 15.4 8.28   12 2.39 0.539 6.0, 29.5 -0.89
SWR/J m 30.6 9.77   12 2.82 0.32 18.7, 51.1 0.46


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 32.5818 3.1513 38.7844 26.3792
A/J m 25.2182 3.1513 31.4208 19.0156
AKR/J m 9.55 3.0172 15.4885 3.6115
BALB/cByJ m 21.6167 3.0172 27.5552 15.6781
BUB/BnJ m 30.6429 3.9504 38.4182 22.8675
C3H/HeJ m 10.1333 3.0172 16.0719 4.1948
C57BL/6J m 27.8545 3.1513 34.0571 21.652
C57L/J m 40.2545 3.1513 46.4571 34.052
CAST/EiJ m 36.99 3.3052 43.4953 30.4847
CBA/J m 6.7167 3.0172 12.6552 0.7781
CE/J m 22.75 3.0172 28.6885 16.8115
DBA/2J m 26.025 3.0172 31.9635 20.0865
FVB/NJ m 36.4 3.0172 42.3385 30.4615
I/LnJ m 16.8833 3.0172 22.8219 10.9448
KK/HlJ m 12.6333 4.2669 21.0317 4.235
LP/J m 15.9167 3.0172 21.8552 9.9781
NOD/ShiLtJ m 23.7727 3.1513 29.9753 17.5701
NZB/BlNJ m 49.1583 3.0172 55.0969 43.2198
P/J m 11.475 3.0172 17.4135 5.5365
PL/J m 35.325 3.0172 41.2635 29.3865
RBF/DnJ m 30.1545 3.1513 36.3571 23.952
RF/J m 35.5 3.0172 41.4385 29.5615
RIIIS/J m 33.2917 3.0172 39.2302 27.3531
SEA/GnJ m 13.85 3.0172 19.7885 7.9115
SJL/J m 43.3364 3.1513 49.539 37.1338
SM/J m 18.7917 3.0172 24.7302 12.8531
SPRET/EiJ m 15.35 3.0172 21.2885 9.4115
SWR/J m 30.5667 3.0172 36.5052 24.6281




  GWAS USING LINEAR MIXED MODELS