Project measure / variable:   Tordoff1   NaCl_pref150

ID, description, units MPD:6104   NaCl_pref150   preference for NaCl (sodium chloride) solutions   [%]  concentration 150 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for NaCl (sodium chloride) solutions concentration 150 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means51.4   %
Median of the strain means52.4   %
SD of the strain means± 18.1
Coefficient of variation (CV)0.352
Min–max range of strain means17.2   –   87.2   %
Mean sample size per strain11.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 101029.2972 3741.8258 11.4425 < 0.0001
Residuals 287 93852.3045 327.0115


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 58.3 14.3   12 4.13 0.245 32.6, 80.0 0.38
A/J m 54.7 21.9   12 6.33 0.401 17.3, 77.2 0.18
AKR/J m 17.3 14.9   12 4.29 0.86 1.9, 50.0 -1.88
BALB/cByJ m 48.1 26.7   12 7.7 0.555 14.5, 94.9 -0.18
BUB/BnJ m 74.1 23.6   7 8.91 0.318 42.9, 95.6 1.25
C3H/HeJ m 17.9 16.9   12 4.87 0.941 2.2, 50.8 -1.85
C57BL/6J m 43.6 21.8   11 6.56 0.5 18.9, 75.0 -0.43
C57L/J m 57.0 10.3   10 3.24 0.18 42.3, 73.7 0.31
CAST/EiJ m 87.2 8.42   12 2.43 0.0966 65.1, 94.9 1.98
CBA/J m 17.2 14.0   12 4.05 0.815 3.2, 42.1 -1.89
CE/J m 73.1 26.0   12 7.5 0.355 4.3, 99.0 1.2
DBA/2J m 57.2 16.2   12 4.67 0.282 30.4, 81.1 0.32
FVB/NJ m 74.1 12.9   12 3.74 0.175 43.5, 90.8 1.25
I/LnJ m 47.9 12.8   12 3.69 0.267 19.6, 65.8 -0.19
KK/HlJ m 45.7 10.3   6 4.21 0.226 31.7, 58.6 -0.32
LP/J m 50.0 21.9   11 6.59 0.437 8.7, 75.0 -0.08
NOD/ShiLtJ m 57.7 15.7   12 4.55 0.273 24.7, 78.0 0.35
NZB/BlNJ m 61.4 7.3   12 2.11 0.119 52.9, 74.7 0.55
P/J m 49.6 20.3   12 5.86 0.41 5.3, 79.8 -0.1
PL/J m 43.2 17.0   12 4.91 0.393 20.4, 71.2 -0.45
RBF/DnJ m 69.8 14.7   12 4.25 0.211 37.3, 91.9 1.02
RF/J m 61.7 13.6   10 4.31 0.221 41.9, 81.3 0.57
RIIIS/J m 50.1 21.4   12 6.19 0.429 10.0, 85.2 -0.07
SEA/GnJ m 28.1 20.8   11 6.26 0.738 4.3, 50.8 -1.29
SJL/J m 69.4 15.5   11 4.68 0.224 44.3, 92.7 0.99
SM/J m 37.2 30.1   12 8.7 0.809 4.4, 88.2 -0.79
SPRET/EiJ m 27.7 16.3   10 5.17 0.59 2.6, 58.1 -1.31
SWR/J m 60.4 15.0   12 4.32 0.248 31.9, 78.9 0.5


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 58.2667 5.2202 68.5415 47.9918
A/J m 54.725 5.2202 64.9998 44.4502
AKR/J m 17.275 5.2202 27.5498 7.0002
BALB/cByJ m 48.0833 5.2202 58.3582 37.8085
BUB/BnJ m 74.1286 6.8349 87.5815 60.6757
C3H/HeJ m 17.9167 5.2202 28.1915 7.6418
C57BL/6J m 43.5545 5.4524 54.2862 32.8228
C57L/J m 56.97 5.7185 68.2255 45.7145
CAST/EiJ m 87.1917 5.2202 97.4665 76.9168
CBA/J m 17.2083 5.2202 27.4832 6.9335
CE/J m 73.1333 5.2202 83.4082 62.8585
DBA/2J m 57.25 5.2202 67.5248 46.9752
FVB/NJ m 74.0667 5.2202 84.3415 63.7918
I/LnJ m 47.9333 5.2202 58.2082 37.6585
KK/HlJ m 45.7 7.3825 60.2308 31.1692
LP/J m 50.0091 5.4524 60.7408 39.2774
NOD/ShiLtJ m 57.6583 5.2202 67.9332 47.3835
NZB/BlNJ m 61.4167 5.2202 71.6915 51.1418
P/J m 49.5667 5.2202 59.8415 39.2918
PL/J m 43.225 5.2202 53.4998 32.9502
RBF/DnJ m 69.7667 5.2202 80.0415 59.4918
RF/J m 61.72 5.7185 72.9755 50.4645
RIIIS/J m 50.05 5.2202 60.3248 39.7752
SEA/GnJ m 28.1182 5.4524 38.8499 17.3865
SJL/J m 69.3818 5.4524 80.1135 58.6501
SM/J m 37.2167 5.2202 47.4915 26.9418
SPRET/EiJ m 27.7 5.7185 38.9555 16.4445
SWR/J m 60.375 5.2202 70.6498 50.1002




  GWAS USING LINEAR MIXED MODELS