Project measure / variable:   Tordoff1   NaCl_pref75

ID, description, units MPD:6103   NaCl_pref75   preference for NaCl (sodium chloride) solutions   [%]  concentration 75 mM  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure bottle choice test
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  STRAIN COMPARISON PLOT
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Tordoff1 - preference for NaCl (sodium chloride) solutions concentration 75 mM



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means58.0   %
Median of the strain means58.5   %
SD of the strain means± 13.9
Coefficient of variation (CV)0.239
Min–max range of strain means21.3   –   82.7   %
Mean sample size per strain11.3   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 60321.414 2234.1264 8.0155 < 0.0001
Residuals 285 79436.8882 278.7259


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 60.3 19.4   12 5.61 0.322 7.0, 86.5 0.16
A/J m 56.5 19.6   11 5.91 0.347 3.7, 80.0 -0.11
AKR/J m 47.7 21.7   12 6.26 0.454 3.4, 74.6 -0.74
BALB/cByJ m 68.5 18.2   11 5.48 0.265 37.0, 93.9 0.75
BUB/BnJ m 71.0 12.8   7 4.85 0.181 48.1, 86.3 0.94
C3H/HeJ m 21.3 16.3   12 4.69 0.762 4.7, 50.0 -2.65
C57BL/6J m 60.1 17.5   12 5.05 0.291 34.8, 81.3 0.15
C57L/J m 54.1 11.2   10 3.55 0.207 36.7, 68.3 -0.28
CAST/EiJ m 82.7 4.79   11 1.44 0.0579 74.1, 87.5 1.78
CBA/J m 28.2 19.9   12 5.76 0.706 3.6, 63.6 -2.15
CE/J m 69.8 27.1   12 7.82 0.388 4.1, 96.2 0.85
DBA/2J m 51.2 15.0   11 4.53 0.293 32.8, 75.4 -0.49
FVB/NJ m 75.1 10.2   12 2.96 0.136 60.4, 91.8 1.23
I/LnJ m 61.8 12.2   11 3.69 0.198 36.0, 72.0 0.27
KK/HlJ m 56.1 21.4   6 8.74 0.381 32.5, 90.7 -0.14
LP/J m 54.5 13.6   11 4.1 0.25 31.4, 74.2 -0.25
NOD/ShiLtJ m 55.1 16.6   11 5.01 0.301 23.1, 74.4 -0.21
NZB/BlNJ m 62.6 11.5   12 3.31 0.183 41.1, 82.5 0.33
P/J m 68.3 13.2   12 3.8 0.193 41.5, 84.3 0.74
PL/J m 53.1 13.8   11 4.17 0.261 30.8, 72.7 -0.36
RBF/DnJ m 74.7 12.4   12 3.59 0.166 45.1, 90.6 1.2
RF/J m 56.9 18.2   12 5.25 0.32 16.9, 83.0 -0.08
RIIIS/J m 67.6 18.4   11 5.55 0.272 25.0, 89.8 0.69
SEA/GnJ m 45.3 9.64   12 2.78 0.213 21.7, 56.1 -0.92
SJL/J m 69.9 11.3   11 3.39 0.161 50.6, 88.6 0.86
SM/J m 39.3 23.1   12 6.66 0.588 1.3, 87.1 -1.35
SPRET/EiJ m 45.6 21.5   12 6.21 0.472 8.3, 72.9 -0.9
SWR/J m 67.5 16.0   12 4.63 0.238 43.2, 90.9 0.68


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 60.2583 4.8195 69.7446 50.7721
A/J m 56.4636 5.0338 66.3717 46.5556
AKR/J m 47.7167 4.8195 57.2029 38.2304
BALB/cByJ m 68.5 5.0338 78.4081 58.5919
BUB/BnJ m 70.9714 6.3101 83.3918 58.551
C3H/HeJ m 21.3333 4.8195 30.8196 11.8471
C57BL/6J m 60.075 4.8195 69.5612 50.5888
C57L/J m 54.11 5.2795 64.5017 43.7183
CAST/EiJ m 82.7182 5.0338 92.6262 72.8101
CBA/J m 28.2333 4.8195 37.7196 18.7471
CE/J m 69.8333 4.8195 79.3196 60.3471
DBA/2J m 51.2091 5.0338 61.1172 41.301
FVB/NJ m 75.1417 4.8195 84.6279 65.6554
I/LnJ m 61.8455 5.0338 71.7535 51.9374
KK/HlJ m 56.15 6.8157 69.5656 42.7344
LP/J m 54.5455 5.0338 64.4535 44.6374
NOD/ShiLtJ m 55.1364 5.0338 65.0444 45.2283
NZB/BlNJ m 62.6 4.8195 72.0862 53.1138
P/J m 68.35 4.8195 77.8362 58.8638
PL/J m 53.0909 5.0338 62.999 43.1828
RBF/DnJ m 74.675 4.8195 84.1612 65.1888
RF/J m 56.875 4.8195 66.3612 47.3888
RIIIS/J m 67.6091 5.0338 77.5172 57.701
SEA/GnJ m 45.3417 4.8195 54.8279 35.8554
SJL/J m 69.9 5.0338 79.8081 59.9919
SM/J m 39.25 4.8195 48.7362 29.7638
SPRET/EiJ m 45.625 4.8195 55.1112 36.1388
SWR/J m 67.4667 4.8195 76.9529 57.9804




  GWAS USING LINEAR MIXED MODELS