Project measure / variable:   Tordoff1   NaCl_bwavg

ID, description, units MPD:6102   NaCl_bwavg   average body weight during NaCl test (local parameter)   [g]  
Data set, strains Tordoff1   inbred   28 strains     sex: m     age: 4-12wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Tordoff1 - average body weight during NaCl test (local parameter)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means24.5   g
Median of the strain means25.0   g
SD of the strain means± 4.55
Coefficient of variation (CV)0.186
Min–max range of strain means12.8   –   34.0   g
Mean sample size per strain11.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 6059.0967 224.411 71.6378 < 0.0001
Residuals 295 924.1106 3.1326


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 22.3 2.2   12 0.636 0.0989 18.6, 26.1 -0.48
A/J m 23.5 1.93   12 0.557 0.0819 20.8, 27.2 -0.21
AKR/J m 32.3 2.08   12 0.601 0.0645 29.1, 35.8 1.72
BALB/cByJ m 27.9 1.72   12 0.496 0.0617 25.3, 30.0 0.75
BUB/BnJ m 28.1 2.13   7 0.806 0.0758 24.7, 31.5 0.8
C3H/HeJ m 24.5 1.56   12 0.451 0.0638 21.6, 26.2 0.01
C57BL/6J m 25.1 1.57   12 0.454 0.0626 22.5, 28.1 0.14
C57L/J m 23.9 1.58   11 0.478 0.0662 20.5, 25.8 -0.13
CAST/EiJ m 13.6 1.29   12 0.372 0.0946 12.6, 17.1 -2.39
CBA/J m 26.7 1.63   12 0.47 0.061 23.5, 28.7 0.49
CE/J m 24.9 2.0   12 0.577 0.0803 21.6, 28.2 0.09
DBA/2J m 25.3 1.7   12 0.49 0.0672 22.1, 27.4 0.18
FVB/NJ m 25.9 1.59   12 0.459 0.0614 22.7, 28.3 0.31
I/LnJ m 22.7 1.58   12 0.456 0.0694 19.7, 24.4 -0.39
KK/HlJ m 34.0 2.67   6 1.09 0.0785 31.2, 38.1 2.09
LP/J m 22.7 1.78   12 0.515 0.0787 20.4, 26.5 -0.39
NOD/ShiLtJ m 27.4 1.88   12 0.543 0.0685 23.6, 29.5 0.64
NZB/BlNJ m 27.1 1.91   12 0.552 0.0707 24.9, 30.3 0.58
P/J m 23.6 2.03   12 0.585 0.0859 20.7, 26.2 -0.19
PL/J m 21.2 1.44   12 0.416 0.0679 18.9, 23.7 -0.72
RBF/DnJ m 27.2 1.33   12 0.383 0.0488 25.0, 29.8 0.6
RF/J m 27.8 2.05   12 0.591 0.0735 24.2, 31.1 0.73
RIIIS/J m 20.9 2.26   12 0.654 0.108 15.2, 23.8 -0.79
SEA/GnJ m 27.2 1.04   12 0.3 0.0382 25.7, 29.0 0.6
SJL/J m 25.7 1.69   11 0.509 0.0656 23.0, 27.4 0.27
SM/J m 18.5 2.18   12 0.63 0.118 14.8, 21.5 -1.31
SPRET/EiJ m 12.8 0.8   12 0.231 0.0624 11.2, 14.2 -2.57
SWR/J m 22.5 1.52   12 0.44 0.0676 20.4, 25.0 -0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 22.275 0.5109 23.2805 21.2695
A/J m 23.55 0.5109 24.5555 22.5445
AKR/J m 32.25 0.5109 33.2555 31.2445
BALB/cByJ m 27.8833 0.5109 28.8889 26.8778
BUB/BnJ m 28.1429 0.669 29.4594 26.8263
C3H/HeJ m 24.4833 0.5109 25.4889 23.4778
C57BL/6J m 25.1333 0.5109 26.1389 24.1278
C57L/J m 23.9364 0.5336 24.9866 22.8861
CAST/EiJ m 13.6167 0.5109 14.6222 12.6111
CBA/J m 26.7083 0.5109 27.7139 25.7028
CE/J m 24.8833 0.5109 25.8889 23.8778
DBA/2J m 25.2583 0.5109 26.2639 24.2528
FVB/NJ m 25.9 0.5109 26.9055 24.8945
I/LnJ m 22.7417 0.5109 23.7472 21.7361
KK/HlJ m 34.0 0.7226 35.422 32.578
LP/J m 22.65 0.5109 23.6555 21.6445
NOD/ShiLtJ m 27.4333 0.5109 28.4389 26.4278
NZB/BlNJ m 27.05 0.5109 28.0555 26.0445
P/J m 23.5833 0.5109 24.5889 22.5778
PL/J m 21.2333 0.5109 22.2389 20.2278
RBF/DnJ m 27.2167 0.5109 28.2222 26.2111
RF/J m 27.85 0.5109 28.8555 26.8445
RIIIS/J m 20.8833 0.5109 21.8889 19.8778
SEA/GnJ m 27.1667 0.5109 28.1722 26.1611
SJL/J m 25.7182 0.5336 26.7684 24.6679
SM/J m 18.4917 0.5109 19.4972 17.4861
SPRET/EiJ m 12.8167 0.5109 13.8222 11.8111
SWR/J m 22.525 0.5109 23.5305 21.5195




  GWAS USING LINEAR MIXED MODELS