Project measure / variable:   Tordoff1   NaCl_age

ID, description, units MPD:6101   NaCl_age   age at start of NaCl test (local parameter)   [d]  
Data set, strains Tordoff1   inbred   28 strains     sex: m
Procedure colony observation
Ontology mappings


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  STRAIN COMPARISON PLOT
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Tordoff1 - age at start of NaCl test (local parameter)



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested28 strains
Mean of the strain means64.4   d
Median of the strain means67.0   d
SD of the strain means± 7.22
Coefficient of variation (CV)0.112
Min–max range of strain means47.2   –   81.0   d
Mean sample size per strain11.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 27 15180.4414 562.2386 20.3558 < 0.0001
Residuals 296 8175.6667 27.6205


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129P3/J m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
A/J m 74.0 0.0   12 0.0 0.0 74.0, 74.0 1.32
AKR/J m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
BALB/cByJ m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
BUB/BnJ m 48.0 10.6   7 4.0 0.22 30.0, 58.0 -2.28
C3H/HeJ m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
C57BL/6J m 65.0 0.0   12 0.0 0.0 65.0, 65.0 0.08
C57L/J m 65.0 0.0   12 0.0 0.0 65.0, 65.0 0.08
CAST/EiJ m 58.6 9.18   12 2.65 0.157 44.0, 65.0 -0.81
CBA/J m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
CE/J m 56.5 10.5   12 3.04 0.186 44.0, 72.0 -1.1
DBA/2J m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
FVB/NJ m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
I/LnJ m 58.0 5.97   12 1.72 0.103 51.0, 65.0 -0.89
KK/HlJ m 72.0 0.0   6 0.0 0.0 72.0, 72.0 1.05
LP/J m 67.6 5.55   12 1.6 0.0821 60.0, 74.0 0.44
NOD/ShiLtJ m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
NZB/BlNJ m 65.0 0.0   12 0.0 0.0 65.0, 65.0 0.08
P/J m 65.2 7.39   12 2.13 0.113 53.0, 74.0 0.1
PL/J m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
RBF/DnJ m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
RF/J m 53.0 11.9   12 3.45 0.225 32.0, 67.0 -1.59
RIIIS/J m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35
SEA/GnJ m 81.0 10.3   12 2.98 0.128 67.0, 88.0 2.29
SJL/J m 67.0 0.0   11 0.0 0.0 67.0, 67.0 0.35
SM/J m 57.4 8.68   12 2.51 0.151 44.0, 65.0 -0.98
SPRET/EiJ m 47.2 6.41   12 1.85 0.136 39.0, 53.0 -2.39
SWR/J m 67.0 0.0   12 0.0 0.0 67.0, 67.0 0.35


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129P3/J m 67.0 1.5171 69.9857 64.0143
A/J m 74.0 1.5171 76.9857 71.0143
AKR/J m 67.0 1.5171 69.9857 64.0143
BALB/cByJ m 67.0 1.5171 69.9857 64.0143
BUB/BnJ m 48.0 1.9864 51.9093 44.0907
C3H/HeJ m 67.0 1.5171 69.9857 64.0143
C57BL/6J m 65.0 1.5171 67.9857 62.0143
C57L/J m 65.0 1.5171 67.9857 62.0143
CAST/EiJ m 58.5833 1.5171 61.5691 55.5976
CBA/J m 67.0 1.5171 69.9857 64.0143
CE/J m 56.5 1.5171 59.4857 53.5143
DBA/2J m 67.0 1.5171 69.9857 64.0143
FVB/NJ m 67.0 1.5171 69.9857 64.0143
I/LnJ m 58.0 1.5171 60.9857 55.0143
KK/HlJ m 72.0 2.1456 76.2225 67.7775
LP/J m 67.5833 1.5171 70.5691 64.5976
NOD/ShiLtJ m 67.0 1.5171 69.9857 64.0143
NZB/BlNJ m 65.0 1.5171 67.9857 62.0143
P/J m 65.25 1.5171 68.2357 62.2643
PL/J m 67.0 1.5171 69.9857 64.0143
RBF/DnJ m 67.0 1.5171 69.9857 64.0143
RF/J m 53.0 1.5171 55.9857 50.0143
RIIIS/J m 67.0 1.5171 69.9857 64.0143
SEA/GnJ m 81.0 1.5171 83.9857 78.0143
SJL/J m 67.0 1.5846 70.1185 63.8815
SM/J m 57.4167 1.5171 60.4024 54.4309
SPRET/EiJ m 47.1667 1.5171 50.1524 44.1809
SWR/J m 67.0 1.5171 69.9857 64.0143




  GWAS USING LINEAR MIXED MODELS