Project measure / variable:   Kliethermes1   time_OP

ID, description, units MPD:59941   time_OP   time spent head dipping in object preference task to assess novelty seeking, 10 min test   [s]  
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
Procedure hole board test
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  STRAIN COMPARISON PLOT
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Kliethermes1 - time spent head dipping in object preference task to assess novelty seeking, 10 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means40.8   s 35.3   s
Median of the strain means35.3   s 36.1   s
SD of the strain means± 20.2 ± 8.73
Coefficient of variation (CV)0.494 0.247
Min–max range of strain means17.2   –   78.7   s 19.9   –   49.1   s
Mean sample size per strain6.3   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 721.7686 721.7686 1.223 0.2704
strain 13 21597.2583 1661.3276 2.8151 0.0012
sex:strain 13 16081.5996 1237.0461 2.0962 0.017
Residuals 158 93242.5727 590.1429


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 25.0 8.59   6 3.51 0.344 11.7, 37.9 -0.78
129S1/SvImJ m 19.9 14.9   6 6.09 0.75 5.3, 46.6 -1.76
A/J f 17.2 10.5   6 4.28 0.609 6.0, 30.9 -1.17
A/J m 49.1 26.5   6 10.8 0.54 23.5, 93.6 1.58
AKR/J f 46.1 22.1   6 9.03 0.48 20.5, 83.1 0.26
AKR/J m 39.7 20.4   6 8.31 0.512 14.7, 65.6 0.51
BALB/cByJ f 60.6 89.4   5 40.0 1.48 10.4, 220.0 0.98
BALB/cByJ m 23.2 17.3   6 7.06 0.747 8.6, 51.9 -1.38
BTBR T+ Itpr3tf/J f 40.1 31.8   6 13.0 0.792 7.0, 89.6 -0.03
BTBR T+ Itpr3tf/J m 36.6 9.04   6 3.69 0.247 26.9, 49.4 0.15
C3H/HeJ f 19.1 8.27   6 3.38 0.434 9.4, 31.3 -1.08
C3H/HeJ m 37.4 23.0   6 9.39 0.615 13.6, 67.4 0.24
C57BL/6J f 23.1 11.4   12 3.29 0.493 8.8, 49.5 -0.88
C57BL/6J m 26.0 18.7   12 5.38 0.717 2.4, 54.7 -1.06
C57L/J f 29.9 6.84   6 2.79 0.229 16.8, 36.6 -0.54
C57L/J m 40.8 21.3   6 8.69 0.521 12.6, 70.2 0.63
DBA/2J f 36.8 16.4   12 4.73 0.445 13.3, 61.3 -0.2
DBA/2J m 35.6 24.2   12 6.99 0.68 3.8, 80.4 0.04
FVB/NJ f 33.9 23.3   6 9.51 0.688 9.4, 77.6 -0.34
FVB/NJ m 33.3 25.4   6 10.4 0.762 9.7, 73.2 -0.23
NOD/ShiLtJ f 54.0 13.8   5 6.17 0.255 33.8, 69.5 0.65
NOD/ShiLtJ m 48.3 20.1   6 8.22 0.417 17.5, 71.3 1.49
NZB/BlNJ f 29.1 30.4   6 12.4 1.04 5.4, 86.9 -0.58
NZB/BlNJ m 29.2 17.2   6 7.02 0.588 15.6, 62.5 -0.7
PERA/EiJ f 77.5 35.7   5 16.0 0.46 34.5, 110.0 1.82
PERA/EiJ m 32.2 12.7   4 6.37 0.396 14.9, 44.5 -0.35
PL/J f 78.7 25.2   6 10.3 0.321 43.4, 104.0 1.88
PL/J m 42.7 11.2   5 5.02 0.263 31.5, 61.5 0.85


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 24.9833 9.9175 44.5713 5.3953
129S1/SvImJ m 19.8833 9.9175 39.4713 0.2953
A/J f 17.1833 9.9175 36.7713 -2.4047
A/J m 49.0667 9.9175 68.6547 29.4787
AKR/J f 46.0667 9.9175 65.6547 26.4787
AKR/J m 39.7333 9.9175 59.3213 20.1453
BALB/cByJ f 60.56 10.8641 82.0176 39.1024
BALB/cByJ m 23.1667 9.9175 42.7547 3.5787
BTBR T+ Itpr3tf/J f 40.1 9.9175 59.688 20.512
BTBR T+ Itpr3tf/J m 36.6167 9.9175 56.2047 17.0287
C3H/HeJ f 19.0833 9.9175 38.6713 -0.5047
C3H/HeJ m 37.4167 9.9175 57.0047 17.8287
C57BL/6J f 23.125 7.0127 36.9758 9.2742
C57BL/6J m 26.0 7.0127 39.8508 12.1492
C57L/J f 29.9333 9.9175 49.5213 10.3453
C57L/J m 40.85 9.9175 60.438 21.262
DBA/2J f 36.8 7.0127 50.6508 22.9492
DBA/2J m 35.6083 7.0127 49.4591 21.7575
FVB/NJ f 33.8667 9.9175 53.4547 14.2787
FVB/NJ m 33.2833 9.9175 52.8713 13.6953
NOD/ShiLtJ f 54.02 10.8641 75.4776 32.5624
NOD/ShiLtJ m 48.3167 9.9175 67.9047 28.7287
NZB/BlNJ f 29.1333 9.9175 48.7213 9.5453
NZB/BlNJ m 29.25 9.9175 48.838 9.662
PERA/EiJ f 77.48 10.8641 98.9376 56.0224
PERA/EiJ m 32.2 12.1464 56.1903 8.2097
PL/J f 78.65 9.9175 98.238 59.062
PL/J m 42.68 10.8641 64.1376 21.2224


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 22.4333 7.0127 36.2841 8.5825
A/J both 33.125 7.0127 46.9758 19.2742
AKR/J both 42.9 7.0127 56.7508 29.0492
BALB/cByJ both 41.8633 7.355 56.3902 27.3365
BTBR T+ Itpr3tf/J both 38.3583 7.0127 52.2091 24.5075
C3H/HeJ both 28.25 7.0127 42.1008 14.3992
C57BL/6J both 24.5625 4.9588 34.3565 14.7685
C57L/J both 35.3917 7.0127 49.2425 21.5409
DBA/2J both 36.2042 4.9588 45.9982 26.4102
FVB/NJ both 33.575 7.0127 47.4258 19.7242
NOD/ShiLtJ both 51.1683 7.355 65.6952 36.6415
NZB/BlNJ both 29.1917 7.0127 43.0425 15.3409
PERA/EiJ both 54.84 8.1481 70.9332 38.7468
PL/J both 60.665 7.355 75.1919 46.1381




  GWAS USING LINEAR MIXED MODELS