Project measure / variable:   Kliethermes1   distance_OP

ID, description, units MPD:59938   distance_OP   distance traveled in object preference task to assess novelty seeking, 10 min test   [cm]  
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
Procedure hole board test
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  STRAIN COMPARISON PLOT
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Kliethermes1 - distance traveled in object preference task to assess novelty seeking, 10 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means2077   cm 1995   cm
Median of the strain means1893   cm 2220   cm
SD of the strain means± 1095 ± 866
Coefficient of variation (CV)0.527 0.434
Min–max range of strain means252   –   4055   cm 450   –   3213   cm
Mean sample size per strain6.3   mice 6.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4865.4392 4865.4392 0.0169 0.8968
strain 13 131647584.8592 10126737.2969 35.1313 < 0.0001
sex:strain 13 19916546.1275 1532042.0098 5.3149 < 0.0001
Residuals 158 45544101.3757 288253.8062


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 844.0 446.0   6 182.0 0.529 133.0, 1418.0 -1.13
129S1/SvImJ m 1172.0 472.0   6 193.0 0.403 621.0, 1877.0 -0.95
A/J f 252.0 221.0   6 90.4 0.88 48.3, 673.0 -1.67
A/J m 450.0 70.3   6 28.7 0.156 361.0, 538.0 -1.79
AKR/J f 2056.0 630.0   6 257.0 0.306 1058.0, 2612.0 -0.02
AKR/J m 2506.0 492.0   6 201.0 0.196 1941.0, 3252.0 0.59
BALB/cByJ f 1821.0 634.0   5 284.0 0.348 894.0, 2409.0 -0.23
BALB/cByJ m 597.0 362.0   6 148.0 0.606 40.0, 1040.0 -1.62
BTBR T+ Itpr3tf/J f 1965.0 913.0   6 373.0 0.465 1110.0, 3682.0 -0.1
BTBR T+ Itpr3tf/J m 2312.0 897.0   6 366.0 0.388 1052.0, 3484.0 0.37
C3H/HeJ f 1787.0 390.0   6 159.0 0.218 1093.0, 2273.0 -0.26
C3H/HeJ m 1639.0 382.0   6 156.0 0.233 1186.0, 2262.0 -0.41
C57BL/6J f 2312.0 372.0   12 107.0 0.161 1856.0, 2994.0 0.21
C57BL/6J m 2128.0 406.0   12 117.0 0.191 1624.0, 2782.0 0.15
C57L/J f 3244.0 625.0   6 255.0 0.193 2262.0, 3796.0 1.07
C57L/J m 3213.0 258.0   6 105.0 0.0804 2850.0, 3520.0 1.41
DBA/2J f 1307.0 373.0   12 108.0 0.285 783.0, 1931.0 -0.7
DBA/2J m 2382.0 697.0   12 201.0 0.293 1503.0, 3588.0 0.45
FVB/NJ f 4017.0 381.0   6 155.0 0.0948 3506.0, 4467.0 1.77
FVB/NJ m 3163.0 289.0   6 118.0 0.0914 2761.0, 3557.0 1.35
NOD/ShiLtJ f 4055.0 678.0   5 303.0 0.167 3256.0, 4894.0 1.81
NOD/ShiLtJ m 2848.0 516.0   6 211.0 0.181 2210.0, 3360.0 0.99
NZB/BlNJ f 1283.0 867.0   6 354.0 0.675 482.0, 2582.0 -0.72
NZB/BlNJ m 1807.0 467.0   6 191.0 0.258 1279.0, 2370.0 -0.22
PERA/EiJ f 1702.0 754.0   5 337.0 0.443 915.0, 2958.0 -0.34
PERA/EiJ m 1401.0 406.0   4 203.0 0.29 952.0, 1878.0 -0.69
PL/J f 2430.0 547.0   6 223.0 0.225 1660.0, 3307.0 0.32
PL/J m 2314.0 724.0   5 324.0 0.313 1484.0, 3434.0 0.37


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 844.1667 219.1855 1277.0783 411.255
129S1/SvImJ m 1171.8833 219.1855 1604.795 738.9717
A/J f 251.5667 219.1855 684.4783 -181.345
A/J m 450.2667 219.1855 883.1783 17.355
AKR/J f 2056.2667 219.1855 2489.1783 1623.355
AKR/J m 2506.3667 219.1855 2939.2783 2073.455
BALB/cByJ f 1820.98 240.1057 2295.2109 1346.7491
BALB/cByJ m 597.35 219.1855 1030.2616 164.4384
BTBR T+ Itpr3tf/J f 1964.65 219.1855 2397.5616 1531.7384
BTBR T+ Itpr3tf/J m 2311.8333 219.1855 2744.745 1878.9217
C3H/HeJ f 1786.9667 219.1855 2219.8783 1354.055
C3H/HeJ m 1639.0667 219.1855 2071.9783 1206.155
C57BL/6J f 2311.7667 154.9876 2617.8814 2005.6519
C57BL/6J m 2127.525 154.9876 2433.6397 1821.4103
C57L/J f 3243.6667 219.1855 3676.5783 2810.755
C57L/J m 3212.9667 219.1855 3645.8783 2780.055
DBA/2J f 1307.4667 154.9876 1613.5814 1001.3519
DBA/2J m 2382.0417 154.9876 2688.1564 2075.9269
FVB/NJ f 4016.9667 219.1855 4449.8783 3584.055
FVB/NJ m 3162.7333 219.1855 3595.645 2729.8217
NOD/ShiLtJ f 4055.22 240.1057 4529.4509 3580.9891
NOD/ShiLtJ m 2848.35 219.1855 3281.2616 2415.4384
NZB/BlNJ f 1283.25 219.1855 1716.1616 850.3384
NZB/BlNJ m 1807.25 219.1855 2240.1616 1374.3384
PERA/EiJ f 1702.0 240.1057 2176.2309 1227.7691
PERA/EiJ m 1400.85 268.4464 1931.0563 870.6437
PL/J f 2429.7333 219.1855 2862.645 1996.8217
PL/J m 2313.98 240.1057 2788.2109 1839.7491


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1008.025 154.9876 1314.1397 701.9103
A/J both 350.9167 154.9876 657.0314 44.8019
AKR/J both 2281.3167 154.9876 2587.4314 1975.2019
BALB/cByJ both 1209.165 162.5523 1530.2209 888.1091
BTBR T+ Itpr3tf/J both 2138.2417 154.9876 2444.3564 1832.1269
C3H/HeJ both 1713.0167 154.9876 2019.1314 1406.9019
C57BL/6J both 2219.6458 109.5928 2436.1016 2003.19
C57L/J both 3228.3167 154.9876 3534.4314 2922.2019
DBA/2J both 1844.7542 109.5928 2061.21 1628.2984
FVB/NJ both 3589.85 154.9876 3895.9647 3283.7353
NOD/ShiLtJ both 3451.785 162.5523 3772.8409 3130.7291
NZB/BlNJ both 1545.25 154.9876 1851.3647 1239.1353
PERA/EiJ both 1551.425 180.0793 1907.0982 1195.7518
PL/J both 2371.8567 162.5523 2692.9125 2050.8008




  GWAS USING LINEAR MIXED MODELS