Phenotype measure:   Kliethermes1   time_rears_MS

ID, description, units MPD:59903   time_rears_MS   time spent rearing in a task to assess novelty seeking, 30 min test   [s]
Data set, strains Kliethermes1   inbred   14 strains     sex: both     age: 8wks
Procedure monitoring system
Ontology mappings

  STRAIN COMPARISON PLOT
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Kliethermes1 - time spent rearing in a task to assess novelty seeking, 30 min test



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested14 strains14 strains
Mean of the strain means128   s 160   s
Median of the strain means97.6   s 146   s
SD of the strain means± 110 ± 109
Coefficient of variation (CV)0.856 0.682
Min–max range of strain means3.03   –   386   s 25.6   –   425   s
Mean sample size per strain6.5   mice 6.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 51545.3192 51545.3192 22.9528 < 0.0001
strain 13 1847478.1664 142113.7051 63.2824 < 0.0001
sex:strain 13 39907.6148 3069.8165 1.367 0.1808
Residuals 160 359312.9862 2245.7062


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 3.03 4.25   6 1.73 1.4 -1.14
129S1/SvImJ m 43.8 41.2   6 16.8 0.941 -1.07
A/J f 17.5 15.4   6 6.3 0.881 -1.01
A/J m 25.6 18.8   6 7.66 0.735 2.6, 48.9 -1.23
AKR/J f 66.7 21.4   6 8.73 0.321 39.2, 93.0 -0.56
AKR/J m 89.0 21.6   6 8.83 0.243 66.0, 112.0 -0.65
BALB/cByJ f 65.2 49.6   6 20.3 0.761 3.5, 129.0 -0.57
BALB/cByJ m 161.0 48.1   6 19.6 0.299 95.8, 244.0 0.01
BTBR T+ Itpr3tf/J f 68.3 34.5   6 14.1 0.504 25.0, 124.0 -0.55
BTBR T+ Itpr3tf/J m 128.0 89.2   6 36.4 0.695 22.5, 270.0 -0.29
C3H/HeJ f 118.0 42.9   6 17.5 0.362 93.4, 205.0 -0.09
C3H/HeJ m 144.0 61.0   6 24.9 0.424 60.5, 210.0 -0.15
C57BL/6J f 85.2 16.7   12 4.83 0.196 56.1, 107.0 -0.39
C57BL/6J m 153.0 46.9   12 13.5 0.307 75.0, 221.0 -0.07
C57L/J f 174.0 51.3   6 20.9 0.296 117.0, 263.0 0.42
C57L/J m 149.0 34.1   6 13.9 0.229 102.0, 197.0 -0.1
DBA/2J f 142.0 33.3   12 9.62 0.234 74.9, 197.0 0.12
DBA/2J m 168.0 35.2   9 11.7 0.21 129.0, 218.0 0.07
FVB/NJ f 386.0 26.0   6 10.6 0.0674 363.0, 431.0 2.35
FVB/NJ m 425.0 76.5   6 31.2 0.18 334.0, 527.0 2.42
NOD/ShiLtJ f 332.0 91.8   6 37.5 0.276 191.0, 463.0 1.85
NOD/ShiLtJ m 361.0 89.7   6 36.6 0.248 240.0, 468.0 1.84
NZB/BlNJ f 65.4 59.3   6 24.2 0.907 5.8, 174.0 -0.57
NZB/BlNJ m 110.0 33.4   6 13.7 0.304 55.1, 156.0 -0.46
PERA/EiJ f 110.0 20.4   6 8.33 0.186 80.7, 128.0 -0.17
PERA/EiJ m 102.0 47.6   6 19.4 0.467 39.4, 181.0 -0.53
PL/J f 163.0 46.4   6 18.9 0.285 113.0, 237.0 0.32
PL/J m 183.0 61.1   5 27.3 0.334 117.0, 259.0 0.21


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 3.0333 19.3464 41.2406 -35.174
129S1/SvImJ m 43.7667 19.3464 81.974 5.5594
A/J f 17.5333 19.3464 55.7406 -20.674
A/J m 25.55 19.3464 63.7573 -12.6573
AKR/J f 66.6667 19.3464 104.874 28.4594
AKR/J m 89.0 19.3464 127.2073 50.7927
BALB/cByJ f 65.1833 19.3464 103.3906 26.976
BALB/cByJ m 160.9833 19.3464 199.1906 122.776
BTBR T+ Itpr3tf/J f 68.3333 19.3464 106.5406 30.126
BTBR T+ Itpr3tf/J m 128.3833 19.3464 166.5906 90.176
C3H/HeJ f 118.3667 19.3464 156.574 80.1594
C3H/HeJ m 144.05 19.3464 182.2573 105.8427
C57BL/6J f 85.2333 13.68 112.25 58.2167
C57BL/6J m 152.5583 13.68 179.575 125.5417
C57L/J f 173.5167 19.3464 211.724 135.3094
C57L/J m 148.9 19.3464 187.1073 110.6927
DBA/2J f 142.3667 13.68 169.3833 115.35
DBA/2J m 167.5333 15.7963 198.7295 136.3372
FVB/NJ f 386.2667 19.3464 424.474 348.0594
FVB/NJ m 425.0833 19.3464 463.2906 386.876
NOD/ShiLtJ f 332.4167 19.3464 370.624 294.2094
NOD/ShiLtJ m 361.3167 19.3464 399.524 323.1094
NZB/BlNJ f 65.3667 19.3464 103.574 27.1594
NZB/BlNJ m 110.1 19.3464 148.3073 71.8927
PERA/EiJ f 109.7167 19.3464 147.924 71.5094
PERA/EiJ m 101.85 19.3464 140.0573 63.6427
PL/J f 162.8667 19.3464 201.074 124.6594
PL/J m 183.14 21.193 224.994 141.286


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.4 13.68 50.4166 -3.6166
A/J both 21.5417 13.68 48.5583 -5.475
AKR/J both 77.8333 13.68 104.85 50.8167
BALB/cByJ both 113.0833 13.68 140.1 86.0667
BTBR T+ Itpr3tf/J both 98.3583 13.68 125.375 71.3417
C3H/HeJ both 131.2083 13.68 158.225 104.1917
C57BL/6J both 118.8958 9.6732 137.9995 99.7922
C57L/J both 161.2083 13.68 188.225 134.1917
DBA/2J both 154.95 10.4483 175.5843 134.3157
FVB/NJ both 405.675 13.68 432.6916 378.6584
NOD/ShiLtJ both 346.8667 13.68 373.8833 319.85
NZB/BlNJ both 87.7333 13.68 114.75 60.7167
PERA/EiJ both 105.7833 13.68 132.8 78.7667
PL/J both 173.0033 14.3477 201.3386 144.668




  GWAS USING LINEAR MIXED MODELS