Project measure / variable:   Palmer5   bw_end

ID, description, units MPD:59702   bw_end   body weight at end of testing   [g]  
Data set, strains Palmer5   F1 Tcf7l2   30 strains     sex: both     age: 14wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Palmer5 - body weight at end of testing



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means25.5   g 35.8   g
Median of the strain means24.4   g 35.4   g
SD of the strain means± 4.08 ± 4.73
Coefficient of variation (CV)0.160 0.132
Min–max range of strain means19.4   –   37.2   g 27.2   –   44.7   g
Mean sample size per strain5.1   mice 5.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 7806.1677 7806.1677 971.5106 < 0.0001
strain 29 5135.8083 177.0968 22.0405 < 0.0001
sex:strain 29 830.8487 28.65 3.5656 < 0.0001
Residuals 251 2016.8057 8.0351


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129SB6F1 f 21.3 0.399   6 0.163 0.0187 20.8, 22.0 -1.02
129SB6F1 m 34.2 4.32   5 1.93 0.126 29.8, 41.4 -0.34
AB6F1 f 27.1 4.43   3 2.56 0.163 22.4, 31.2 0.4
AB6F1 m 39.6 6.55   4 3.27 0.165 31.5, 46.6 0.8
AKB6F1 f 26.8 1.18   4 0.591 0.0442 25.6, 28.2 0.32
AKB6F1 m 40.0 2.12   2   1.5 0.053 38.5, 41.5 0.88
BKSB6F1 f 22.6 0.713   5 0.319 0.0315 21.7, 23.5 -0.71
BKSB6F1 m 29.6 2.09   6 0.851 0.0705 25.8, 31.2 -1.32
BTBRB6F1 f 32.7 3.98   4 1.99 0.122 29.7, 38.4 1.77
BTBRB6F1 m 42.3 3.39   4 1.7 0.0802 39.5, 46.9 1.37
BUB6F1 f 24.4 1.96   7 0.739 0.0801 21.1, 27.8 -0.26
BUB6F1 m 33.6 2.47   5 1.1 0.0736 29.7, 35.9 -0.47
C3B6F1 f 24.6 1.16   4 0.58 0.047 23.4, 26.2 -0.22
C3B6F1 m 40.4 5.84   4 2.92 0.145 31.6, 43.5 0.97
C57BL/6J f 19.4 1.16   8 0.41 0.0597 17.9, 21.4 -1.49
C57BL/6J m 27.2 1.99   9 0.665 0.0734 24.6, 31.2 -1.82
C57LB6F1 f 24.6 1.9   7 0.717 0.077 22.6, 28.3 -0.22
C57LB6F1 m 38.2 5.97   5 2.67 0.156 28.9, 43.9 0.5
C58B6F1 f 22.5 1.2   6 0.492 0.0536 20.9, 24.3 -0.73
C58B6F1 m 33.8 2.65   4 1.33 0.0786 30.0, 35.9 -0.43
CBAB6F1 f 26.2 1.62   5 0.726 0.0618 23.6, 27.8 0.18
CBAB6F1 m 32.7 6.06   4 3.03 0.185 28.2, 41.3 -0.66
CByB6F1 f 23.4 1.28   4 0.638 0.0545 22.0, 25.1 -0.51
CByB6F1 m 32.8 2.22   5 0.994 0.0678 29.5, 35.2 -0.64
D2B6F1 f 27.5 1.4   5 0.628 0.051 25.5, 28.9 0.49
D2B6F1 m 37.8 5.17   5 2.31 0.137 28.7, 41.0 0.42
DDYB6F1 f 24.4 0.976   4 0.488 0.04 23.6, 25.7 -0.26
DDYB6F1 m 42.6 2.14   5 0.959 0.0503 39.1, 44.7 1.43
FVBB6F1 f 24.0 1.77   5 0.79 0.0735 22.2, 26.5 -0.36
FVBB6F1 m 35.3 2.66   7 1.01 0.0753 32.6, 39.3 -0.11
IB6F1 f 26.6 0.935   6 0.382 0.0352 25.5, 28.0 0.27
IB6F1 m 33.9 5.6   6 2.29 0.165 27.6, 41.3 -0.41
KKB6F1 f 37.2 1.27   4 0.636 0.0342 35.6, 38.7 2.87
KKB6F1 m 43.9 3.02   5 1.35 0.0688 40.6, 47.6 1.71
LPB6F1 f 22.7 2.55   3 1.47 0.112 20.1, 25.2 -0.68
LPB6F1 m 35.5 2.23   6 0.91 0.0628 32.4, 39.0 -0.07
MAB6F1 f 21.1 1.41   6 0.577 0.067 20.1, 23.8 -1.07
MAB6F1 m 30.6 3.32   5 1.49 0.109 27.5, 35.4 -1.1
MRLB6F1 f 31.9 2.36   7 0.891 0.074 27.7, 34.9 1.57
MRLB6F1 m 38.0 4.78   5 2.14 0.126 34.1, 46.0 0.46
NODB6F1 f 23.5 1.01   5 0.452 0.0431 22.4, 24.8 -0.49
NODB6F1 m 32.2 2.32   6 0.947 0.0721 30.2, 36.0 -0.77
NONB6F1 f 29.3 2.31   4 1.16 0.0789 26.2, 31.8 0.94
NONB6F1 m 44.7 6.31   5 2.82 0.141 38.2, 51.1 1.88
NZBB6F1 f 29.1 2.57   5 1.15 0.0881 25.8, 32.1 0.89
NZBB6F1 m 39.0 2.66   4 1.33 0.0683 36.2, 42.6 0.67
NZWB6F1 f 32.2 2.36   4 1.18 0.0732 30.7, 35.7 1.65
NZWB6F1 m 37.0 1.87   6 0.763 0.0505 35.0, 40.1 0.25
PLB6F1 f 21.7 2.11   5 0.944 0.0973 18.6, 23.8 -0.93
PLB6F1 m 30.3 1.49   6 0.609 0.0493 28.4, 32.6 -1.17
RIIIB6F1 f 21.0 1.5   5 0.67 0.0715 19.0, 22.3 -1.1
RIIIB6F1 m 28.3 1.08   8 0.381 0.0381 26.4, 29.9 -1.59
SEAB6F1 f 27.4 1.25   9 0.417 0.0457 25.5, 29.2 0.47
SEAB6F1 m 37.5 4.12   7 1.56 0.11 31.1, 42.0 0.36
SJLB6F1 f 23.1 1.77   6 0.724 0.077 19.8, 24.9 -0.58
SJLB6F1 m 32.3 1.94   4 0.968 0.06 30.5, 34.9 -0.74
SMB6F1 f 22.3 2.63   4 1.32 0.118 20.1, 26.0 -0.78
SMB6F1 m 40.5 1.36   6 0.554 0.0335 39.0, 42.3 0.99
SWRB6F1 f 23.8 1.61   4 0.807 0.0678 21.7, 25.3 -0.41
SWRB6F1 m 30.8 0.843   4 0.421 0.0274 29.5, 31.3 -1.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129SB6F1 f 21.35 1.1572 23.6291 19.0709
129SB6F1 m 34.16 1.2677 36.6566 31.6634
AB6F1 f 27.1 1.6366 30.3232 23.8768
AB6F1 m 39.575 1.4173 42.3663 36.7837
AKB6F1 f 26.75 1.4173 29.5413 23.9587
AKB6F1 m 40.0 2.0044 43.9475 36.0525
BKSB6F1 f 22.64 1.2677 25.1366 20.1434
BKSB6F1 m 29.5833 1.1572 31.8625 27.3042
BTBRB6F1 f 32.675 1.4173 35.4663 29.8837
BTBRB6F1 m 42.3 1.4173 45.0913 39.5087
BUB6F1 f 24.4143 1.0714 26.5243 22.3042
BUB6F1 m 33.56 1.2677 36.0566 31.0634
C3B6F1 f 24.65 1.4173 27.4413 21.8587
C3B6F1 m 40.35 1.4173 43.1413 37.5587
C57BL/6J f 19.4125 1.0022 21.3863 17.4387
C57BL/6J m 27.1889 0.9449 29.0498 25.328
C57LB6F1 f 24.6286 1.0714 26.7386 22.5185
C57LB6F1 m 38.22 1.2677 40.7166 35.7234
C58B6F1 f 22.4833 1.1572 24.7625 20.2042
C58B6F1 m 33.75 1.4173 36.5413 30.9587
CBAB6F1 f 26.24 1.2677 28.7366 23.7434
CBAB6F1 m 32.725 1.4173 35.5163 29.9337
CByB6F1 f 23.425 1.4173 26.2163 20.6337
CByB6F1 m 32.78 1.2677 35.2766 30.2834
D2B6F1 f 27.54 1.2677 30.0366 25.0434
D2B6F1 m 37.84 1.2677 40.3366 35.3434
DDYB6F1 f 24.4 1.4173 27.1913 21.6087
DDYB6F1 m 42.62 1.2677 45.1166 40.1234
FVBB6F1 f 24.04 1.2677 26.5366 21.5434
FVBB6F1 m 35.3429 1.0714 37.4529 33.2328
IB6F1 f 26.55 1.1572 28.8291 24.2709
IB6F1 m 33.8667 1.1572 36.1458 31.5875
KKB6F1 f 37.2 1.4173 39.9913 34.4087
KKB6F1 m 43.86 1.2677 46.3566 41.3634
LPB6F1 f 22.7333 1.6366 25.9565 19.5102
LPB6F1 m 35.5 1.1572 37.7791 33.2209
MAB6F1 f 21.1 1.1572 23.3791 18.8209
MAB6F1 m 30.6 1.2677 33.0966 28.1034
MRLB6F1 f 31.8714 1.0714 33.9815 29.7614
MRLB6F1 m 38.04 1.2677 40.5366 35.5434
NODB6F1 f 23.46 1.2677 25.9566 20.9634
NODB6F1 m 32.1833 1.1572 34.4625 29.9042
NONB6F1 f 29.3 1.4173 32.0913 26.5087
NONB6F1 m 44.72 1.2677 47.2166 42.2234
NZBB6F1 f 29.12 1.2677 31.6166 26.6234
NZBB6F1 m 39.0 1.4173 41.7913 36.2087
NZWB6F1 f 32.2 1.4173 34.9913 29.4087
NZWB6F1 m 37.0 1.1572 39.2791 34.7209
PLB6F1 f 21.7 1.2677 24.1966 19.2034
PLB6F1 m 30.2833 1.1572 32.5625 28.0042
RIIIB6F1 f 20.96 1.2677 23.4566 18.4634
RIIIB6F1 m 28.3125 1.0022 30.2863 26.3387
SEAB6F1 f 27.3667 0.9449 29.2276 25.5058
SEAB6F1 m 37.4571 1.0714 39.5672 35.3471
SJLB6F1 f 23.05 1.1572 25.3291 20.7709
SJLB6F1 m 32.275 1.4173 35.0663 29.4837
SMB6F1 f 22.35 1.4173 25.1413 19.5587
SMB6F1 m 40.5 1.1572 42.7791 38.2209
SWRB6F1 f 23.8 1.4173 26.5913 21.0087
SWRB6F1 m 30.75 1.4173 33.5413 27.9587


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129SB6F1 both 27.755 0.8582 29.4452 26.0648
AB6F1 both 33.3375 1.0825 35.4694 31.2056
AKB6F1 both 33.375 1.2274 35.7924 30.9576
BKSB6F1 both 26.1117 0.8582 27.8019 24.4214
BTBRB6F1 both 37.4875 1.0022 39.4613 35.5137
BUB6F1 both 28.9871 0.8299 30.6216 27.3527
C3B6F1 both 32.5 1.0022 34.4738 30.5262
C57BL/6J both 23.3007 0.6887 24.657 21.9443
C57LB6F1 both 31.4243 0.8299 33.0587 29.7898
C58B6F1 both 28.1167 0.9149 29.9185 26.3149
CBAB6F1 both 29.4825 0.9508 31.355 27.61
CByB6F1 both 28.1025 0.9508 29.975 26.23
D2B6F1 both 32.69 0.8964 34.4554 30.9246
DDYB6F1 both 33.51 0.9508 35.3825 31.6375
FVBB6F1 both 29.6914 0.8299 31.3259 28.057
IB6F1 both 30.2083 0.8183 31.8199 28.5968
KKB6F1 both 40.53 0.9508 42.4025 38.6575
LPB6F1 both 29.1167 1.0022 31.0904 27.1429
MAB6F1 both 25.85 0.8582 27.5402 24.1598
MRLB6F1 both 34.9557 0.8299 36.5902 33.3213
NODB6F1 both 27.8217 0.8582 29.5119 26.1314
NONB6F1 both 37.01 0.9508 38.8825 35.1375
NZBB6F1 both 34.06 0.9508 35.9325 32.1875
NZWB6F1 both 34.6 0.9149 36.4018 32.7982
PLB6F1 both 25.9917 0.8582 27.6819 24.3014
RIIIB6F1 both 24.6363 0.808 26.2276 23.0449
SEAB6F1 both 32.4119 0.7143 33.8186 31.0052
SJLB6F1 both 27.6625 0.9149 29.4643 25.8607
SMB6F1 both 31.425 0.9149 33.2268 29.6232
SWRB6F1 both 27.275 1.0022 29.2488 25.3012




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA