Project measure / variable:   Palmer5   bw_start

ID, description, units MPD:59701   bw_start   body weight at start of testing   [g]  
Data set, strains Palmer5   F1 Tcf7l2   30 strains     sex: both     age: 7wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Palmer5 - body weight at start of testing



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means21.0   g 28.5   g
Median of the strain means20.5   g 27.8   g
SD of the strain means± 2.32 ± 3.22
Coefficient of variation (CV)0.111 0.113
Min–max range of strain means17.1   –   26.2   g 22.8   –   36.0   g
Mean sample size per strain5.1   mice 5.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 4150.732 4150.732 1119.9762 < 0.0001
strain 29 2098.4695 72.361 19.5249 < 0.0001
sex:strain 29 313.701 10.8173 2.9188 < 0.0001
Residuals 251 930.2284 3.7061


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129SB6F1 f 19.4 0.675   6 0.276 0.0348 18.7, 20.5 -0.67
129SB6F1 m 26.0 2.95   5 1.32 0.113 23.7, 30.9 -0.78
AB6F1 f 21.4 1.52   3 0.876 0.0708 19.8, 22.8 0.19
AB6F1 m 29.4 4.41   4 2.2 0.15 24.5, 33.7 0.28
AKB6F1 f 21.2 0.981   4 0.491 0.0463 20.4, 22.6 0.1
AKB6F1 m 32.0 1.63   2   1.15 0.0507 30.9, 33.2 1.08
BKSB6F1 f 19.7 0.968   5 0.433 0.0492 18.1, 20.6 -0.54
BKSB6F1 m 24.3 2.92   6 1.19 0.12 19.1, 27.2 -1.31
BTBRB6F1 f 25.1 1.63   4 0.815 0.0648 24.0, 27.5 1.78
BTBRB6F1 m 32.2 1.36   4 0.682 0.0424 30.7, 34.0 1.15
BUB6F1 f 20.3 1.24   7 0.467 0.0608 18.8, 21.9 -0.29
BUB6F1 m 27.8 1.17   5 0.525 0.0422 26.2, 29.3 -0.22
C3B6F1 f 21.2 1.07   4 0.534 0.0505 20.3, 22.7 0.1
C3B6F1 m 31.2 4.46   4 2.23 0.143 24.9, 34.9 0.83
C57BL/6J f 17.1 1.03   8 0.364 0.0602 15.4, 18.6 -1.67
C57BL/6J m 22.8 1.27   9 0.424 0.0559 21.4, 25.4 -1.77
C57LB6F1 f 20.6 1.04   7 0.394 0.0505 19.5, 22.4 -0.16
C57LB6F1 m 31.1 3.04   5 1.36 0.0977 26.4, 34.3 0.8
C58B6F1 f 19.9 1.23   6 0.5 0.0617 18.0, 21.8 -0.46
C58B6F1 m 27.0 1.89   4 0.945 0.0699 24.4, 28.9 -0.47
CBAB6F1 f 21.7 0.838   5 0.375 0.0387 20.7, 23.0 0.32
CBAB6F1 m 25.9 3.23   4 1.61 0.125 22.8, 29.9 -0.81
CByB6F1 f 19.8 1.01   4 0.504 0.0511 18.7, 21.1 -0.5
CByB6F1 m 26.6 2.04   5 0.913 0.0767 23.8, 29.4 -0.59
D2B6F1 f 22.3 2.11   5 0.942 0.0945 20.0, 25.0 0.58
D2B6F1 m 26.7 3.88   5 1.73 0.145 20.0, 29.9 -0.56
DDYB6F1 f 21.2 0.569   4 0.284 0.0268 20.6, 21.9 0.1
DDYB6F1 m 34.4 3.5   5 1.56 0.102 29.2, 37.5 1.83
FVBB6F1 f 20.1 1.38   5 0.616 0.0686 19.1, 22.5 -0.37
FVBB6F1 m 27.7 0.93   7 0.352 0.0336 26.6, 28.9 -0.25
IB6F1 f 21.3 0.902   6 0.368 0.0424 20.4, 22.8 0.15
IB6F1 m 27.5 4.23   6 1.73 0.154 22.1, 34.0 -0.31
KKB6F1 f 25.9 1.22   4 0.609 0.0471 24.1, 26.8 2.13
KKB6F1 m 36.0 1.75   5 0.784 0.0486 34.0, 38.6 2.32
LPB6F1 f 20.1 0.907   3 0.524 0.0452 19.4, 21.1 -0.37
LPB6F1 m 28.4 0.476   6 0.194 0.0167 28.0, 28.9 -0.03
MAB6F1 f 17.9 0.585   6 0.239 0.0326 17.0, 18.7 -1.32
MAB6F1 m 25.1 0.924   5 0.413 0.0369 24.1, 26.1 -1.06
MRLB6F1 f 25.0 1.52   7 0.575 0.0609 23.5, 27.5 1.74
MRLB6F1 m 30.0 2.62   5 1.17 0.0871 25.5, 32.0 0.46
NODB6F1 f 19.0 0.39   5 0.174 0.0205 18.6, 19.6 -0.85
NODB6F1 m 27.5 1.39   6 0.568 0.0507 25.0, 29.1 -0.31
NONB6F1 f 23.0 1.19   4 0.597 0.0518 22.2, 24.8 0.88
NONB6F1 m 33.4 4.2   5 1.88 0.126 28.2, 37.9 1.52
NZBB6F1 f 23.0 2.78   5 1.24 0.121 20.4, 27.3 0.88
NZBB6F1 m 31.8 2.56   4 1.28 0.0805 29.3, 35.2 1.02
NZWB6F1 f 26.2 0.707   4 0.354 0.027 25.4, 27.1 2.26
NZWB6F1 m 31.6 1.55   6 0.631 0.0489 30.2, 34.3 0.96
PLB6F1 f 18.6 1.77   5 0.792 0.095 16.9, 20.6 -1.02
PLB6F1 m 25.2 1.38   6 0.563 0.0548 23.2, 27.2 -1.03
RIIIB6F1 f 18.7 1.34   5 0.598 0.0714 17.5, 21.0 -0.98
RIIIB6F1 m 24.5 1.04   8 0.366 0.0422 23.3, 26.2 -1.24
SEAB6F1 f 21.7 1.08   9 0.362 0.0499 20.3, 23.6 0.32
SEAB6F1 m 28.3 1.47   7 0.556 0.052 27.0, 31.1 -0.07
SJLB6F1 f 20.3 1.51   6 0.615 0.0744 17.7, 22.2 -0.29
SJLB6F1 m 26.8 0.476   4 0.238 0.0178 26.3, 27.3 -0.53
SMB6F1 f 18.4 1.4   4 0.701 0.0764 16.8, 20.2 -1.11
SMB6F1 m 27.9 2.06   6 0.842 0.0739 25.4, 30.6 -0.19
SWRB6F1 f 18.8 1.03   4 0.516 0.0549 17.6, 20.0 -0.93
SWRB6F1 m 26.2 0.492   4 0.246 0.0188 25.6, 26.8 -0.72


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129SB6F1 f 19.4 0.7859 20.9479 17.8521
129SB6F1 m 26.02 0.8609 27.7156 24.3244
AB6F1 f 21.4333 1.1115 23.6223 19.2443
AB6F1 m 29.35 0.9626 31.2457 27.4543
AKB6F1 f 21.175 0.9626 23.0707 19.2793
AKB6F1 m 32.05 1.3613 34.731 29.369
BKSB6F1 f 19.68 0.8609 21.3756 17.9844
BKSB6F1 m 24.2833 0.7859 25.8312 22.7355
BTBRB6F1 f 25.15 0.9626 27.0457 23.2543
BTBRB6F1 m 32.175 0.9626 34.0707 30.2793
BUB6F1 f 20.3286 0.7276 21.7616 18.8955
BUB6F1 m 27.82 0.8609 29.5156 26.1244
C3B6F1 f 21.175 0.9626 23.0707 19.2793
C3B6F1 m 31.15 0.9626 33.0457 29.2543
C57BL/6J f 17.0875 0.6806 18.428 15.747
C57BL/6J m 22.7556 0.6417 24.0194 21.4917
C57LB6F1 f 20.6429 0.7276 22.0759 19.2098
C57LB6F1 m 31.14 0.8609 32.8356 29.4444
C58B6F1 f 19.8667 0.7859 21.4145 18.3188
C58B6F1 m 27.025 0.9626 28.9207 25.1293
CBAB6F1 f 21.66 0.8609 23.3556 19.9644
CBAB6F1 m 25.875 0.9626 27.7707 23.9793
CByB6F1 f 19.75 0.9626 21.6457 17.8543
CByB6F1 m 26.62 0.8609 28.3156 24.9244
D2B6F1 f 22.28 0.8609 23.9756 20.5844
D2B6F1 m 26.72 0.8609 28.4156 25.0244
DDYB6F1 f 21.25 0.9626 23.1457 19.3543
DDYB6F1 m 34.42 0.8609 36.1156 32.7244
FVBB6F1 f 20.08 0.8609 21.7756 18.3844
FVBB6F1 m 27.7286 0.7276 29.1616 26.2955
IB6F1 f 21.2833 0.7859 22.8312 19.7355
IB6F1 m 27.5167 0.7859 29.0645 25.9688
KKB6F1 f 25.875 0.9626 27.7707 23.9793
KKB6F1 m 36.04 0.8609 37.7356 34.3444
LPB6F1 f 20.0667 1.1115 22.2557 17.8777
LPB6F1 m 28.4333 0.7859 29.9812 26.8855
MAB6F1 f 17.9167 0.7859 19.4645 16.3688
MAB6F1 m 25.06 0.8609 26.7556 23.3644
MRLB6F1 f 24.9571 0.7276 26.3902 23.5241
MRLB6F1 m 30.04 0.8609 31.7356 28.3444
NODB6F1 f 19.02 0.8609 20.7156 17.3244
NODB6F1 m 27.45 0.7859 28.9979 25.9021
NONB6F1 f 23.05 0.9626 24.9457 21.1543
NONB6F1 m 33.4 0.8609 35.0956 31.7044
NZBB6F1 f 23.04 0.8609 24.7356 21.3444
NZBB6F1 m 31.8 0.9626 33.6957 29.9043
NZWB6F1 f 26.2 0.9626 28.0957 24.3043
NZWB6F1 m 31.5833 0.7859 33.1312 30.0355
PLB6F1 f 18.64 0.8609 20.3356 16.9444
PLB6F1 m 25.1667 0.7859 26.7145 23.6188
RIIIB6F1 f 18.72 0.8609 20.4156 17.0244
RIIIB6F1 m 24.5375 0.6806 25.878 23.197
SEAB6F1 f 21.7222 0.6417 22.986 20.4584
SEAB6F1 m 28.2571 0.7276 29.6902 26.8241
SJLB6F1 f 20.2667 0.7859 21.8145 18.7188
SJLB6F1 m 26.8 0.9626 28.6957 24.9043
SMB6F1 f 18.35 0.9626 20.2457 16.4543
SMB6F1 m 27.9167 0.7859 29.4645 26.3688
SWRB6F1 f 18.8 0.9626 20.6957 16.9043
SWRB6F1 m 26.175 0.9626 28.0707 24.2793


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129SB6F1 both 22.71 0.5829 23.8579 21.5621
AB6F1 both 25.3917 0.7352 26.8395 23.9438
AKB6F1 both 26.6125 0.8336 28.2542 24.9708
BKSB6F1 both 21.9817 0.5829 23.1296 20.8337
BTBRB6F1 both 28.6625 0.6806 30.003 27.322
BUB6F1 both 24.0743 0.5636 25.1843 22.9643
C3B6F1 both 26.1625 0.6806 27.503 24.822
C57BL/6J both 19.9215 0.4677 20.8427 19.0004
C57LB6F1 both 25.8914 0.5636 27.0015 24.7814
C58B6F1 both 23.4458 0.6213 24.6695 22.2221
CBAB6F1 both 23.7675 0.6457 25.0392 22.4958
CByB6F1 both 23.185 0.6457 24.4567 21.9133
D2B6F1 both 24.5 0.6088 25.699 23.301
DDYB6F1 both 27.835 0.6457 29.1067 26.5633
FVBB6F1 both 23.9043 0.5636 25.0143 22.7943
IB6F1 both 24.4 0.5557 25.4945 23.3055
KKB6F1 both 30.9575 0.6457 32.2292 29.6858
LPB6F1 both 24.25 0.6806 25.5905 22.9095
MAB6F1 both 21.4883 0.5829 22.6363 20.3404
MRLB6F1 both 27.4986 0.5636 28.6086 26.3885
NODB6F1 both 23.235 0.5829 24.3829 22.0871
NONB6F1 both 28.225 0.6457 29.4967 26.9533
NZBB6F1 both 27.42 0.6457 28.6917 26.1483
NZWB6F1 both 28.8917 0.6213 30.1154 27.668
PLB6F1 both 21.9033 0.5829 23.0513 20.7554
RIIIB6F1 both 21.6288 0.5487 22.7095 20.548
SEAB6F1 both 24.9897 0.4851 25.945 24.0343
SJLB6F1 both 23.5333 0.6213 24.757 22.3096
SMB6F1 both 23.1333 0.6213 24.357 21.9096
SWRB6F1 both 22.4875 0.6806 23.828 21.147




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA