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Project measure / variable:   Palmer3   immobility

ID, description, units MPD:59241   immobility   duration of immobility   [s]  
Data set, strains Palmer3   F1 Tcf7l2   30 strains     sex: both     age: 7-14wks
Procedure forced swim test
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  STRAIN COMPARISON PLOT
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Palmer3 - duration of immobility



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested30 strains30 strains
Mean of the strain means85.9   s 83.4   s
Median of the strain means92.8   s 77.8   s
SD of the strain means± 37.8 ± 35.8
Coefficient of variation (CV)0.440 0.430
Min–max range of strain means20.4   –   168   s 19.2   –   181   s
Mean sample size per strain5.2   mice 5.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 335.5712 335.5712 0.2905 0.5904
strain 28 308114.3368 11004.0835 9.5253 < 0.0001
sex:strain 28 58142.4214 2076.5151 1.7975 0.0103
Residuals 249 287655.6583 1155.2436


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
(129S x B6-Tcf7l2)F1 f 126.0 46.1   6 18.8 0.364 40.1, 172.0 1.06
(129S x B6-Tcf7l2)F1 m 108.0 51.0   5 22.8 0.473 61.6, 163.0 0.69
(AJ x B6-Tcf7l2)F1 f 117.0 31.0   6 12.7 0.265 77.4, 151.0 0.82
(AJ x B6-Tcf7l2)F1 m 115.0 24.9   4 12.5 0.217 83.0, 141.0 0.88
(AKR x B6-Tcf7l2)F1 f 90.0 37.1   4 18.6 0.413 38.1, 126.0 0.11
(AKR x B6-Tcf7l2)F1 m 46.6 0.0   1   0.0 0.0 46.6, 46.6 -1.03
(B6 x B6-Tcf7l2)F1 f 95.5 39.3   9 13.1 0.411 27.6, 159.0 0.25
(B6 x B6-Tcf7l2)F1 m 91.1 31.5   9 10.5 0.346 31.6, 144.0 0.21
(BALB x B6-Tcf7l2)F1 f 105.0 25.9   5 11.6 0.248 70.2, 130.0 0.5
(BALB x B6-Tcf7l2)F1 m 66.8 25.0   4 12.5 0.373 34.4, 94.5 -0.46
(BLKS x B6-Tcf7l2)F1 f 98.4 19.2   5 8.6 0.195 82.2, 130.0 0.33
(BLKS x B6-Tcf7l2)F1 m 76.4 33.7   5 15.1 0.442 41.2, 119.0 -0.2
(BTBR x B6-Tcf7l2)F1 f 68.4 24.4   6 9.98 0.357 21.0, 85.8 -0.46
(BTBR x B6-Tcf7l2)F1 m 112.0 20.6   5 9.23 0.184 86.5, 140.0 0.8
(BUB x B6-Tcf7l2)F1 f 120.0 30.9   5 13.8 0.259 71.6, 155.0 0.9
(BUB x B6-Tcf7l2)F1 m 89.8 18.5   5 8.28 0.206 72.6, 118.0 0.18
(C3H x B6-Tcf7l2)F1 f 25.7 16.8   7 6.37 0.655 8.2, 50.4 -1.59
(C3H x B6-Tcf7l2)F1 m 60.7 23.7   5 10.6 0.39 34.3, 92.3 -0.63
(C57L x B6-Tcf7l2)F1 f 81.8 29.5   4 14.7 0.36 56.5, 124.0 -0.11
(C57L x B6-Tcf7l2)F1 m 65.9 37.9   5 17.0 0.576 18.1, 115.0 -0.49
(C58 x B6-Tcf7l2)F1 f 22.8 22.5   4 11.2 0.985 1.9, 53.7 -1.67
(C58 x B6-Tcf7l2)F1 m 42.1 14.9   4 7.44 0.353 31.2, 64.1 -1.15
(CBA x B6-Tcf7l2)F1 f 38.0 36.2   4 18.1 0.953 13.8, 90.5 -1.27
(CBA x B6-Tcf7l2)F1 m 37.4 27.3   5 12.2 0.731 6.8, 77.2 -1.28
(DBA x B6-Tcf7l2)F1 f 96.2 27.6   4 13.8 0.287 59.6, 125.0 0.27
(DBA x B6-Tcf7l2)F1 m 108.0 38.3   5 17.1 0.354 63.8, 140.0 0.69
(DDY x B6-Tcf7l2)F1 f 113.0 68.9   5 30.8 0.608 31.3, 191.0 0.72
(DDY x B6-Tcf7l2)F1 m 166.0 27.9   5 12.5 0.168 137.0, 207.0 2.3
(FVB x B6-Tcf7l2)F1 f 50.7 35.7   4 17.9 0.705 16.2, 97.5 -0.93
(FVB x B6-Tcf7l2)F1 m 66.8 30.9   7 11.7 0.462 28.3, 103.0 -0.46
(ILN x B6-Tcf7l2)F1 f 161.0 43.5   4 21.8 0.271 100.0, 194.0 1.99
(ILN x B6-Tcf7l2)F1 m 121.0 52.4   9 17.5 0.433 33.8, 180.0 1.05
(KK x B6-Tcf7l2)F1 f 72.5 48.2   6 19.7 0.665 34.9, 158.0 -0.36
(KK x B6-Tcf7l2)F1 m 86.2 43.0   3 24.8 0.499 41.7, 128.0 0.08
(LP x B6-Tcf7l2)F1 f 168.0 27.3   6 11.1 0.162 117.0, 196.0 2.17
(LP x B6-Tcf7l2)F1 m 181.0 8.49   2   6.0 0.0468 175.0, 187.0 2.72
(MA x B6-Tcf7l2)F1 f 65.2 13.9   5 6.23 0.214 46.3, 83.4 -0.55
(MA x B6-Tcf7l2)F1 m 87.7 28.8   5 12.9 0.328 60.2, 126.0 0.12
(MRL x B6-Tcf7l2)F1 f 117.0 24.3   5 10.8 0.208 87.7, 149.0 0.82
(MRL x B6-Tcf7l2)F1 m 88.7 31.5   5 14.1 0.355 41.6, 120.0 0.15
(NOD x B6-Tcf7l2)F1 f 65.3 46.1   6 18.8 0.706 15.6, 129.0 -0.55
(NOD x B6-Tcf7l2)F1 m 74.4 23.4   7 8.85 0.315 45.4, 108.0 -0.25
(NON x B6-Tcf7l2)F1 f 123.0 43.4   5 19.4 0.352 68.8, 183.0 0.98
(NON x B6-Tcf7l2)F1 m 99.2 33.3   8 11.8 0.336 51.3, 141.0 0.44
(NZB x B6-Tcf7l2)F1 f 70.2 30.0   7 11.3 0.427 32.6, 108.0 -0.42
(NZB x B6-Tcf7l2)F1 m 57.4 27.0   9 8.99 0.47 18.5, 89.2 -0.73
(NZW x B6-Tcf7l2)F1 f 97.4 26.7   4 13.4 0.274 77.9, 136.0 0.3
(NZW x B6-Tcf7l2)F1 m 120.0 52.6   5 23.5 0.438 53.6, 166.0 1.02
(PL x B6-Tcf7l2)F1 f 109.0 50.2   6 20.5 0.461 47.8, 170.0 0.61
(PL x B6-Tcf7l2)F1 m 34.2 21.9   4 11.0 0.64 8.2, 57.8 -1.37
(RIII x B6-Tcf7l2)F1 f 34.6 13.6   6 5.57 0.394 21.2, 53.8 -1.36
(RIII x B6-Tcf7l2)F1 m 79.2 7.25   4 3.63 0.0915 72.4, 86.1 -0.12
(SEA x B6-Tcf7l2)F1 f 55.5 24.0   4 12.0 0.432 26.9, 83.7 -0.81
(SEA x B6-Tcf7l2)F1 m 68.4 24.6   6 10.1 0.36 33.4, 97.5 -0.42
(SJL x B6-Tcf7l2)F1 f 95.6 50.4   6 20.6 0.527 43.1, 166.0 0.26
(SJL x B6-Tcf7l2)F1 m 70.1 44.3   4 22.1 0.631 28.7, 133.0 -0.37
(SM x B6-Tcf7l2)F1 f 74.7 36.2   5 16.2 0.485 30.8, 113.0 -0.3
(SM x B6-Tcf7l2)F1 m 63.3 21.8   5 9.76 0.345 41.8, 91.5 -0.56
(SWR x B6-Tcf7l2)F1 f 20.4 11.5   5 5.13 0.562 10.1, 33.4 -1.73
(SWR x B6-Tcf7l2)F1 m 19.2 19.3   4 9.66 1.01 4.3, 47.0 -1.79


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
(129S x B6-Tcf7l2)F1 f 126.5 13.8759 153.8291 99.1709
(129S x B6-Tcf7l2)F1 m 107.82 15.2003 137.7575 77.8825
(AJ x B6-Tcf7l2)F1 f 117.25 13.8759 144.5791 89.9209
(AJ x B6-Tcf7l2)F1 m 114.825 16.9944 148.2962 81.3538
(B6 x B6-Tcf7l2)F1 f 95.5333 11.3296 117.8474 73.2192
(B6 x B6-Tcf7l2)F1 m 91.1333 11.3296 113.4474 68.8192
(BALB x B6-Tcf7l2)F1 f 104.62 15.2003 134.5575 74.6825
(BALB x B6-Tcf7l2)F1 m 66.85 16.9944 100.3212 33.3788
(BLKS x B6-Tcf7l2)F1 f 98.4 15.2003 128.3375 68.4625
(BLKS x B6-Tcf7l2)F1 m 76.38 15.2003 106.3175 46.4425
(BTBR x B6-Tcf7l2)F1 f 68.4333 13.8759 95.7624 41.1042
(BTBR x B6-Tcf7l2)F1 m 112.08 15.2003 142.0175 82.1425
(BUB x B6-Tcf7l2)F1 f 119.52 15.2003 149.4575 89.5825
(BUB x B6-Tcf7l2)F1 m 89.76 15.2003 119.6975 59.8225
(C3H x B6-Tcf7l2)F1 f 25.7286 12.8466 51.0304 0.4267
(C3H x B6-Tcf7l2)F1 m 60.72 15.2003 90.6575 30.7825
(C57L x B6-Tcf7l2)F1 f 81.825 16.9944 115.2962 48.3538
(C57L x B6-Tcf7l2)F1 m 65.88 15.2003 95.8175 35.9425
(C58 x B6-Tcf7l2)F1 f 22.825 16.9944 56.2962 0.0
(C58 x B6-Tcf7l2)F1 m 42.125 16.9944 75.5962 8.6538
(CBA x B6-Tcf7l2)F1 f 37.95 16.9944 71.4212 4.4788
(CBA x B6-Tcf7l2)F1 m 37.38 15.2003 67.3175 7.4425
(DBA x B6-Tcf7l2)F1 f 96.175 16.9944 129.6462 62.7038
(DBA x B6-Tcf7l2)F1 m 107.96 15.2003 137.8975 78.0225
(DDY x B6-Tcf7l2)F1 f 113.24 15.2003 143.1775 83.3025
(DDY x B6-Tcf7l2)F1 m 166.28 15.2003 196.2175 136.3425
(FVB x B6-Tcf7l2)F1 f 50.675 16.9944 84.1462 17.2038
(FVB x B6-Tcf7l2)F1 m 66.7714 12.8466 92.0733 41.4696
(ILN x B6-Tcf7l2)F1 f 160.975 16.9944 194.4462 127.5038
(ILN x B6-Tcf7l2)F1 m 120.9556 11.3296 143.2697 98.6414
(KK x B6-Tcf7l2)F1 f 72.4833 13.8759 99.8124 45.1542
(KK x B6-Tcf7l2)F1 m 86.2 19.6235 124.8492 47.5508
(LP x B6-Tcf7l2)F1 f 168.3667 13.8759 195.6958 141.0376
(LP x B6-Tcf7l2)F1 m 181.2 24.0338 228.5354 133.8646
(MA x B6-Tcf7l2)F1 f 65.2 15.2003 95.1375 35.2625
(MA x B6-Tcf7l2)F1 m 87.74 15.2003 117.6775 57.8025
(MRL x B6-Tcf7l2)F1 f 116.88 15.2003 146.8175 86.9425
(MRL x B6-Tcf7l2)F1 m 88.74 15.2003 118.6775 58.8025
(NOD x B6-Tcf7l2)F1 f 65.3 13.8759 92.6291 37.9709
(NOD x B6-Tcf7l2)F1 m 74.4143 12.8466 99.7161 49.1125
(NON x B6-Tcf7l2)F1 f 123.08 15.2003 153.0175 93.1425
(NON x B6-Tcf7l2)F1 m 99.1625 12.0169 122.8302 75.4948
(NZB x B6-Tcf7l2)F1 f 70.2429 12.8466 95.5447 44.941
(NZB x B6-Tcf7l2)F1 m 57.3778 11.3296 79.6919 35.0637
(NZW x B6-Tcf7l2)F1 f 97.425 16.9944 130.8962 63.9538
(NZW x B6-Tcf7l2)F1 m 120.06 15.2003 149.9975 90.1225
(PL x B6-Tcf7l2)F1 f 109.0667 13.8759 136.3958 81.7376
(PL x B6-Tcf7l2)F1 m 34.25 16.9944 67.7212 0.7788
(RIII x B6-Tcf7l2)F1 f 34.65 13.8759 61.9791 7.3209
(RIII x B6-Tcf7l2)F1 m 79.25 16.9944 112.7212 45.7788
(SEA x B6-Tcf7l2)F1 f 55.525 16.9944 88.9962 22.0538
(SEA x B6-Tcf7l2)F1 m 68.4167 13.8759 95.7458 41.0876
(SJL x B6-Tcf7l2)F1 f 95.5667 13.8759 122.8958 68.2376
(SJL x B6-Tcf7l2)F1 m 70.1 16.9944 103.5712 36.6288
(SM x B6-Tcf7l2)F1 f 74.7 15.2003 104.6375 44.7625
(SM x B6-Tcf7l2)F1 m 63.26 15.2003 93.1975 33.3225
(SWR x B6-Tcf7l2)F1 f 20.42 15.2003 50.3575 0.0
(SWR x B6-Tcf7l2)F1 m 19.2 16.9944 52.6712 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
(129S x B6-Tcf7l2)F1 both 117.16 10.2906 137.4278 96.8922
(AJ x B6-Tcf7l2)F1 both 116.0375 10.9699 137.643 94.432
(B6 x B6-Tcf7l2)F1 both 93.3333 8.0113 109.1118 77.5549
(BALB x B6-Tcf7l2)F1 both 85.735 11.4002 108.1881 63.2819
(BLKS x B6-Tcf7l2)F1 both 87.39 10.7482 108.559 66.221
(BTBR x B6-Tcf7l2)F1 both 90.2567 10.2906 110.5245 69.9889
(BUB x B6-Tcf7l2)F1 both 104.64 10.7482 125.809 83.471
(C3H x B6-Tcf7l2)F1 both 43.2243 9.9509 62.823 23.6256
(C57L x B6-Tcf7l2)F1 both 73.8525 11.4002 96.3056 51.3994
(C58 x B6-Tcf7l2)F1 both 32.475 12.0169 56.1427 8.8073
(CBA x B6-Tcf7l2)F1 both 37.665 11.4002 60.1181 15.2119
(DBA x B6-Tcf7l2)F1 both 102.0675 11.4002 124.5206 79.6144
(DDY x B6-Tcf7l2)F1 both 139.76 10.7482 160.929 118.591
(FVB x B6-Tcf7l2)F1 both 58.7232 10.6518 79.7024 37.744
(ILN x B6-Tcf7l2)F1 both 140.9653 10.2124 161.0789 120.8516
(KK x B6-Tcf7l2)F1 both 79.3417 12.0169 103.0094 55.674
(LP x B6-Tcf7l2)F1 both 174.7833 13.8759 202.1124 147.4542
(MA x B6-Tcf7l2)F1 both 76.47 10.7482 97.639 55.301
(MRL x B6-Tcf7l2)F1 both 102.81 10.7482 123.979 81.641
(NOD x B6-Tcf7l2)F1 both 69.8571 9.4548 88.4788 51.2355
(NON x B6-Tcf7l2)F1 both 111.1213 9.6883 130.2028 92.0397
(NZB x B6-Tcf7l2)F1 both 63.8103 8.5644 80.6782 46.9424
(NZW x B6-Tcf7l2)F1 both 108.7425 11.4002 131.1956 86.2894
(PL x B6-Tcf7l2)F1 both 71.6583 10.9699 93.2639 50.0528
(RIII x B6-Tcf7l2)F1 both 56.95 10.9699 78.5555 35.3445
(SEA x B6-Tcf7l2)F1 both 61.9708 10.9699 83.5764 40.3653
(SJL x B6-Tcf7l2)F1 both 82.8333 10.9699 104.4389 61.2278
(SM x B6-Tcf7l2)F1 both 68.98 10.7482 90.149 47.811
(SWR x B6-Tcf7l2)F1 both 19.81 11.4002 42.2631 0.0




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA