Phenotype measure:   Schughart4   pctbw_trt_d8

ID, description, units MPD:58728   pctbw_trt_d8   body weight as percent of baseline, infected group   [%]  post-infection day 8
influenza A (H3N2) virus study
Data set, strains Schughart4   inbred w/CC8   5 strains     sex: f     age: 8-12wks
Procedure body weight
Ontology mappings


  STRAIN COMPARISON PLOT
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Schughart4 - body weight as percent of baseline, infected group post-infection day 8



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested5 strains
Mean of the strain means84.2   %
Median of the strain means80.1   %
SD of the strain means± 11.0
Coefficient of variation (CV)0.130
Min–max range of strain means74.2   –   96.4   %
Mean sample size per strain9.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 4334.6259 1083.6565 41.2795 < 0.0001
Residuals 41 1076.3203 26.2517


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 74.9 3.86   6 1.58 0.0516 70.8, 80.6 -0.85
C57BL/6J f 80.1 8.45   6 3.45 0.105 70.5, 89.5 -0.38
NOD/ShiLtJ f 74.2 4.06   6 1.66 0.0547 70.4, 79.4 -0.91
NZO/HlLtJ f 95.6 4.89   14 1.31 0.0512 86.2, 102.0 1.03
PWK/PhJ f 96.4 4.39   14 1.17 0.0456 89.3, 103.0 1.11


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 74.85 2.0917 79.0743 70.6257
C57BL/6J f 80.1483 2.0917 84.3726 75.924
NOD/ShiLtJ f 74.2233 2.0917 78.4476 69.999
NZO/HlLtJ f 95.5807 1.3694 98.3462 92.8153
PWK/PhJ f 96.4043 1.3694 99.1697 93.6388




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.