Phenotype measure:   Schughart4   pctbw_trt_d7

ID, description, units MPD:58727   pctbw_trt_d7   body weight as percent of baseline, infected group   [%]  post-infection day 7
influenza A (H3N2) virus study
Data set, strains Schughart4   inbred w/CC8   5 strains     sex: f     age: 8-12wks
Procedure body weight
Ontology mappings


  STRAIN COMPARISON PLOT
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Schughart4 - body weight as percent of baseline, infected group post-infection day 7



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested5 strains
Mean of the strain means87.5   %
Median of the strain means86.3   %
SD of the strain means± 8.16
Coefficient of variation (CV)0.0933
Min–max range of strain means79.6   –   96.5   %
Mean sample size per strain9.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 2338.6642 584.6661 21.3789 < 0.0001
Residuals 41 1121.2619 27.3479


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 79.7 3.85   6 1.57 0.0484 75.0, 84.5 -0.95
C57BL/6J f 86.3 10.9   6 4.46 0.127 75.6, 100.0 -0.14
NOD/ShiLtJ f 79.6 3.69   6 1.51 0.0463 75.9, 86.0 -0.97
NZO/HlLtJ f 96.5 4.34   14 1.16 0.045 86.7, 102.0 1.11
PWK/PhJ f 95.3 3.25   14 0.869 0.0341 90.6, 102.0 0.96


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 79.6933 2.1349 84.0049 75.3817
C57BL/6J f 86.3167 2.1349 90.6283 82.0051
NOD/ShiLtJ f 79.645 2.1349 83.9566 75.3334
NZO/HlLtJ f 96.4921 1.3976 99.3147 93.6695
PWK/PhJ f 95.3079 1.3976 98.1305 92.4853




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.