Phenotype measure:   Schughart4   pctbw_trt_d6

ID, description, units MPD:58726   pctbw_trt_d6   body weight as percent of baseline, infected group   [%]  post-infection day 6
influenza A (H3N2) virus study
Data set, strains Schughart4   inbred w/CC8   5 strains     sex: f     age: 8-12wks
Procedure body weight
Ontology mappings


  STRAIN COMPARISON PLOT
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Schughart4 - body weight as percent of baseline, infected group post-infection day 6



  MEASURE SUMMARY
Measure Summary Female
Number of strains tested5 strains
Mean of the strain means91.4   %
Median of the strain means92.1   %
SD of the strain means± 5.06
Coefficient of variation (CV)0.0554
Min–max range of strain means86.1   –   97.0   %
Mean sample size per strain9.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 4 878.6657 219.6664 7.8163 0.0001
Residuals 41 1152.2539 28.1038


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 86.1 4.78   6 1.95 0.0555 80.1, 91.8 -1.05
C57BL/6J f 92.1 9.83   6 4.01 0.107 81.0, 104.0 0.13
NOD/ShiLtJ f 86.4 5.71   6 2.33 0.0661 80.5, 96.2 -1.0
NZO/HlLtJ f 97.0 4.47   14 1.2 0.0461 87.4, 105.0 1.1
PWK/PhJ f 95.6 3.19   14 0.852 0.0333 90.4, 102.0 0.82


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 86.12 2.1642 90.4908 81.7492
C57BL/6J f 92.0867 2.1642 96.4574 87.7159
NOD/ShiLtJ f 86.355 2.1642 90.7258 81.9842
NZO/HlLtJ f 97.0393 1.4168 99.9006 94.1779
PWK/PhJ f 95.6364 1.4168 98.4978 92.7751




  GENOME-WIDE ASSOCIATION (GWAS) VIEW
Plot generated with pyLMM using 132K SNP array. Click on plot to view at larger size.