Project measure / variable:   Schughart3   bwA

ID, description, units MPD:57101   bwA   body weight pre-infection   [g]  10 FFU group  
Data set, strains Schughart3   inbred w/CC8   8 strains     sex: both     age: 7-13wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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Schughart3 - body weight pre-infection 10 FFU group



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means20.8   g 24.6   g
Median of the strain means19.9   g 24.3   g
SD of the strain means± 6.92 ± 7.46
Coefficient of variation (CV)0.332 0.303
Min–max range of strain means13.1   –   35.6   g 16.5   –   39.5   g
Mean sample size per strain10.5   mice 10.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 783.6244 783.6244 232.7847 < 0.0001
strain 7 6884.9309 983.5616 292.1783 < 0.0001
sex:strain 7 101.1916 14.4559 4.2943 0.0002
Residuals 150 504.9459 3.3663


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 21.8 1.07   9 0.357 0.0491 20.5, 23.6 0.14
129S1/SvImJ m 25.0 1.51   11 0.455 0.0603 22.4, 27.2 0.05
A/J f 18.7 1.47   10 0.466 0.0788 16.6, 20.9 -0.31
A/J m 23.6 0.599   10 0.189 0.0253 22.6, 24.6 -0.14
C57BL/6J f 21.2 0.973   11 0.293 0.0459 19.5, 23.1 0.05
C57BL/6J m 27.6 1.52   10 0.481 0.055 24.6, 29.4 0.4
CAST/EiJ f 13.1 0.994   10 0.314 0.0756 12.2, 14.9 -1.12
CAST/EiJ m 16.5 1.09   7 0.413 0.0664 15.1, 18.2 -1.09
NOD/ShiLtJ f 23.8 1.77   10 0.56 0.0743 21.3, 26.9 0.43
NOD/ShiLtJ m 28.2 1.84   15 0.475 0.0652 23.6, 31.0 0.48
NZO/HlLtJ f 35.6 2.31   10 0.731 0.0648 32.4, 40.4 2.13
NZO/HlLtJ m 39.5 5.08   9 1.69 0.129 31.1, 47.7 1.99
PWK/PhJ f 15.7 1.27   12 0.365 0.0805 13.0, 17.6 -0.74
PWK/PhJ m 19.1 1.34   10 0.423 0.0701 16.9, 21.4 -0.74
WSB/EiJ f 16.8 1.55   12 0.448 0.0922 14.1, 19.2 -0.58
WSB/EiJ m 17.6 1.21   10 0.383 0.069 15.5, 20.1 -0.94


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 21.8433 0.6116 23.0518 20.6349
129S1/SvImJ m 25.0382 0.5532 26.1312 23.9451
A/J f 18.691 0.5802 19.8374 17.5446
A/J m 23.628 0.5802 24.7744 22.4816
C57BL/6J f 21.1655 0.5532 22.2585 20.0724
C57BL/6J m 27.627 0.5802 28.7734 26.4806
CAST/EiJ f 13.147 0.5802 14.2934 12.0006
CAST/EiJ m 16.4529 0.6935 17.8231 15.0826
NOD/ShiLtJ f 23.83 0.5802 24.9764 22.6836
NOD/ShiLtJ m 28.2313 0.4737 29.1674 27.2953
NZO/HlLtJ f 35.643 0.5802 36.7894 34.4966
NZO/HlLtJ m 39.5033 0.6116 40.7118 38.2949
PWK/PhJ f 15.7317 0.5296 16.7782 14.6851
PWK/PhJ m 19.061 0.5802 20.2074 17.9146
WSB/EiJ f 16.8325 0.5296 17.879 15.786
WSB/EiJ m 17.562 0.5802 18.7084 16.4156


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.4408 0.4123 24.2555 22.626
A/J both 21.1595 0.4103 21.9701 20.3489
C57BL/6J both 24.3962 0.4008 25.1882 23.6042
CAST/EiJ both 14.7999 0.4521 15.6932 13.9066
NOD/ShiLtJ both 26.0307 0.3745 26.7707 25.2907
NZO/HlLtJ both 37.5732 0.4215 38.406 36.7403
PWK/PhJ both 17.3963 0.3928 18.1725 16.6202
WSB/EiJ both 17.1973 0.3928 17.9734 16.4211




  GWAS USING LINEAR MIXED MODELS