Project measure / variable:   GMC18   body_type

ID, description, units MPD:56712   body_type   body type (1=emaciated, 2=slender, 3=normal, 4=pudgy/thick, 5=obese)   [designation]  
Data set, strains GMC18   inbred w/CC8   8 strains     sex: both     age: 17-18wks
Procedure colony observation
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

GMC18 - body type (1=emaciated, 2=slender, 3=normal, 4=pudgy/thick, 5=obese)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains7 strains
Mean of the strain means2.74   designation 2.94   designation
Median of the strain means2.58   designation 2.94   designation
SD of the strain means± 1.04 ± 0.974
Coefficient of variation (CV)0.381 0.331
Min–max range of strain means1.33   –   4.92   designation 1.50   –   4.79   designation
Mean sample size per strain11.6   mice 12.7   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.573 0.573 3.3149 0.0705
strain 6 118.1822 19.697 113.9434 < 0.0001
sex:strain 6 1.4599 0.2433 1.4076 0.2145
Residuals 166 28.6959 0.1729


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 2.5 0.516   16 0.129 0.207 2.0, 3.0 -0.23
129S1/SvImJ m 2.94 0.25   16 0.0625 0.0851 2.0, 3.0 0.0
A/J f 3.06 0.25   16 0.0625 0.0816 3.0, 4.0 0.31
A/J m 3.06 0.25   16 0.0625 0.0816 3.0, 4.0 0.12
C57BL/6J f 3.0 0.0   16 0.0 0.0 3.0, 3.0 0.25
C57BL/6J m 3.0 0.0   16 0.0 0.0 3.0, 3.0 0.06
CAST/EiJ f 2.44 0.527   9 0.176 0.216 2.0, 3.0 -0.29
CAST/EiJ m 2.57 0.535   7 0.202 0.208 2.0, 3.0 -0.38
NOD/ShiLtJ f 2.67 0.485   18 0.114 0.182 2.0, 3.0 -0.07
NOD/ShiLtJ m 2.75 0.447   16 0.112 0.163 2.0, 3.0 -0.2
NZO/HlLtJ f 4.92 0.277   13 0.0769 0.0563 4.0, 5.0 2.09
NZO/HlLtJ m 4.79 0.802   14 0.214 0.168 2.0, 5.0 1.9
PWK/PhJ f 2.0 0.0   2   0.0 0.0 2.0, 2.0 -0.71
WSB/EiJ f 1.33 0.577   3 0.333 0.433 1.0, 2.0 -1.35
WSB/EiJ m 1.5 0.577   4 0.289 0.385 1.0, 2.0 -1.48


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 2.5 0.1039 2.7052 2.2948
129S1/SvImJ m 2.9375 0.1039 3.1427 2.7323
A/J f 3.0625 0.1039 3.2677 2.8573
A/J m 3.0625 0.1039 3.2677 2.8573
C57BL/6J f 3.0 0.1039 3.2052 2.7948
C57BL/6J m 3.0 0.1039 3.2052 2.7948
CAST/EiJ f 2.4444 0.1386 2.7181 2.1708
CAST/EiJ m 2.5714 0.1571 2.8817 2.2612
NOD/ShiLtJ f 2.6667 0.098 2.8602 2.4732
NOD/ShiLtJ m 2.75 0.1039 2.9552 2.5448
NZO/HlLtJ f 4.9231 0.1153 5.1507 4.6954
NZO/HlLtJ m 4.7857 0.1111 5.0051 4.5663
WSB/EiJ f 1.3333 0.24 1.8073 0.8594
WSB/EiJ m 1.5 0.2079 1.9104 1.0896


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 2.7188 0.0735 2.8639 2.5736
A/J both 3.0625 0.0735 3.2076 2.9174
C57BL/6J both 3.0 0.0735 3.1451 2.8549
CAST/EiJ both 2.5079 0.1048 2.7148 2.3011
NOD/ShiLtJ both 2.7083 0.0714 2.8494 2.5673
NZO/HlLtJ both 4.8544 0.0801 5.0125 4.6963
WSB/EiJ both 1.4167 0.1588 1.7301 1.1032




  GWAS USING LINEAR MIXED MODELS