Project measure / variable:   GMC18   body_length

ID, description, units MPD:56702   body_length   body length   [cm]  
Data set, strains GMC18   inbred w/CC8   7 strains     sex: both     age: 17-18wks
Procedure body size and weight
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  STRAIN COMPARISON PLOT
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GMC18 - body length



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested6 strains7 strains
Mean of the strain means9.40   cm 9.42   cm
Median of the strain means9.36   cm 9.54   cm
SD of the strain means± 0.718 ± 0.874
Coefficient of variation (CV)0.0764 0.0928
Min–max range of strain means8.50   –   10.6   cm 8.20   –   10.8   cm
Mean sample size per strain13.8   mice 12.4   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 3.1327 3.1327 63.0889 < 0.0001
strain 4 43.7741 10.9435 220.3907 < 0.0001
sex:strain 4 0.3685 0.0921 1.8551 0.1212
Residuals 152 7.5476 0.0497


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 9.49 0.217   16 0.0544 0.0229 9.0, 9.9 0.13
129S1/SvImJ m 9.68 0.172   16 0.043 0.0178 9.5, 10.0 0.3
A/J f 8.93 0.227   16 0.0568 0.0254 8.4, 9.3 -0.65
A/J m 9.38 0.172   16 0.043 0.0183 9.0, 9.8 -0.05
C57BL/6J f 9.22 0.181   16 0.0452 0.0196 8.9, 9.5 -0.25
C57BL/6J m 9.54 0.146   16 0.0365 0.0153 9.3, 9.8 0.14
CAST/EiJ m 8.2 0.0816   4 0.0408 0.00996 8.1, 8.3 -1.4
NOD/ShiLtJ f 9.66 0.255   18 0.0601 0.0264 9.2, 10.1 0.36
NOD/ShiLtJ m 9.87 0.255   16 0.0637 0.0258 9.5, 10.4 0.51
NZO/HlLtJ f 10.6 0.209   16 0.0523 0.0198 10.2, 11.0 1.67
NZO/HlLtJ m 10.8 0.33   16 0.0824 0.0305 10.3, 11.4 1.58
WSB/EiJ f 8.5 0.0   1   0.0 0.0 8.5, 8.5 -1.25
WSB/EiJ m 8.47 0.153   3 0.0882 0.018 8.3, 8.6 -1.09


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 9.4937 0.0557 9.6038 9.3837
129S1/SvImJ m 9.6813 0.0557 9.7913 9.5712
A/J f 8.9312 0.0557 9.0413 8.8212
A/J m 9.3812 0.0557 9.4913 9.2712
C57BL/6J f 9.225 0.0557 9.3351 9.1149
C57BL/6J m 9.5437 0.0557 9.6538 9.4337
NOD/ShiLtJ f 9.6556 0.0525 9.7593 9.5518
NOD/ShiLtJ m 9.8688 0.0557 9.9788 9.7587
NZO/HlLtJ f 10.5625 0.0557 10.6726 10.4524
NZO/HlLtJ m 10.7937 0.0557 10.9038 10.6837


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 9.5875 0.0394 9.6653 9.5097
A/J both 9.1562 0.0394 9.2341 9.0784
C57BL/6J both 9.3844 0.0394 9.4622 9.3065
NOD/ShiLtJ both 9.7622 0.0383 9.8378 9.6865
NZO/HlLtJ both 10.6781 0.0394 10.756 10.6003




  GWAS USING LINEAR MIXED MODELS