Project measure / variable:   GMC11   bw_before_fast

ID, description, units MPD:56001   bw_before_fast   body weight   [g]  before fast  
Data set, strains GMC11   inbred w/CC8   8 strains     sex: both     age: 13-14wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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GMC11 - body weight before fast



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means22.4   g 27.3   g
Median of the strain means20.8   g 25.4   g
SD of the strain means± 10.5 ± 12.0
Coefficient of variation (CV)0.470 0.441
Min–max range of strain means13.7   –   47.0   g 16.8   –   54.2   g
Mean sample size per strain15.4   mice 15.2   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1493.6175 1493.6175 399.0282 < 0.0001
strain 7 28300.0308 4042.8615 1080.0728 < 0.0001
sex:strain 7 215.8485 30.8355 8.2379 < 0.0001
Residuals 229 857.1786 3.7431


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 21.4 1.56   16 0.391 0.0729 18.7, 24.0 -0.1
129S1/SvImJ m 26.4 2.85   16 0.711 0.108 23.2, 32.6 -0.07
A/J f 20.3 1.18   16 0.296 0.0582 17.3, 22.6 -0.2
A/J m 24.3 1.14   16 0.284 0.0468 22.5, 26.5 -0.25
C57BL/6J f 21.3 1.23   16 0.307 0.0576 19.4, 23.5 -0.11
C57BL/6J m 29.2 1.7   16 0.426 0.0583 26.6, 32.0 0.16
CAST/EiJ f 13.7 0.85   13 0.236 0.0621 12.5, 15.0 -0.83
CAST/EiJ m 16.8 0.655   13 0.182 0.0389 15.6, 17.8 -0.87
NOD/ShiLtJ f 24.0 1.31   18 0.31 0.0547 20.8, 25.7 0.15
NOD/ShiLtJ m 30.2 2.34   16 0.585 0.0776 27.1, 35.2 0.24
NZO/HlLtJ f 47.0 3.42   17 0.83 0.0728 40.3, 54.3 2.33
NZO/HlLtJ m 54.2 3.38   17 0.82 0.0625 48.8, 58.9 2.24
PWK/PhJ f 16.5 1.09   17 0.264 0.0661 14.5, 18.6 -0.56
PWK/PhJ m 20.3 1.41   16 0.354 0.0696 18.1, 22.9 -0.58
WSB/EiJ f 15.1 2.1   10 0.665 0.14 12.5, 19.3 -0.69
WSB/EiJ m 16.9 0.856   12 0.247 0.0508 15.2, 18.1 -0.86


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 21.4312 0.4837 22.3843 20.4782
129S1/SvImJ m 26.3562 0.4837 27.3093 25.4032
A/J f 20.325 0.4837 21.278 19.372
A/J m 24.3312 0.4837 25.2843 23.3782
C57BL/6J f 21.2937 0.4837 22.2468 20.3407
C57BL/6J m 29.225 0.4837 30.178 28.272
CAST/EiJ f 13.6846 0.5366 14.7419 12.6273
CAST/EiJ m 16.8308 0.5366 17.8881 15.7735
NOD/ShiLtJ f 24.0389 0.456 24.9374 23.1404
NOD/ShiLtJ m 30.1687 0.4837 31.1218 29.2157
NZO/HlLtJ f 46.9882 0.4692 47.9128 46.0637
NZO/HlLtJ m 54.1529 0.4692 55.0775 53.2284
PWK/PhJ f 16.4882 0.4692 17.4128 15.5637
PWK/PhJ m 20.325 0.4837 21.278 19.372
WSB/EiJ f 15.05 0.6118 16.2555 13.8445
WSB/EiJ m 16.8667 0.5585 17.9671 15.7662


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.8937 0.342 24.5676 23.2199
A/J both 22.3281 0.342 23.002 21.6542
C57BL/6J both 25.2594 0.342 25.9333 24.5855
CAST/EiJ both 15.2577 0.3794 16.0053 14.5101
NOD/ShiLtJ both 27.1038 0.3324 27.7587 26.4489
NZO/HlLtJ both 50.5706 0.3318 51.2244 49.9168
PWK/PhJ both 18.4066 0.3369 19.0705 17.7427
WSB/EiJ both 15.9583 0.4142 16.7745 15.1422




  GWAS USING LINEAR MIXED MODELS