Project measure / variable:   GMC06   TG

ID, description, units MPD:55525   TG   triglyceride (plasma TG, 16h fast)   [mmol/L]  
Data set, strains GMC06   inbred   5 strains     sex: both     age: 10-11wks
Procedure lipid profile
Ontology mappings

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  STRAIN COMPARISON PLOT
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GMC06 - triglyceride (plasma TG, 16h fast)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains5 strains
Mean of the strain means1.75   mmol/L 2.36   mmol/L
Median of the strain means1.61   mmol/L 2.33   mmol/L
SD of the strain means± 0.469 ± 0.352
Coefficient of variation (CV)0.268 0.149
Min–max range of strain means1.37   –   2.54   mmol/L 1.99   –   2.94   mmol/L
Mean sample size per strain16.6   mice 16.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 15.1643 15.1643 38.7694 < 0.0001
strain 4 21.7472 5.4368 13.8998 < 0.0001
sex:strain 4 0.9514 0.2379 0.6081 0.6574
Residuals 153 59.8447 0.3911


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.37 0.623   16 0.156 0.456 0.751, 2.86 -0.8
129S1/SvImJ m 2.21 0.665   16 0.166 0.301 0.944, 3.14 -0.44
A/J f 1.45 0.554   16 0.138 0.382 0.832, 2.43 -0.63
A/J m 1.99 0.476   16 0.119 0.239 0.927, 2.89 -1.06
C57BL/6J f 1.61 0.391   16 0.0978 0.244 0.904, 2.18 -0.29
C57BL/6J m 2.35 0.816   16 0.204 0.348 1.5, 4.8 -0.04
NOD/ShiLtJ f 1.76 0.855   18 0.202 0.486 0.755, 3.71 0.03
NOD/ShiLtJ m 2.33 0.401   16 0.1 0.172 1.82, 3.1 -0.1
NZO/HlLtJ f 2.54 0.56   17 0.136 0.221 1.91, 3.73 1.69
NZO/HlLtJ m 2.94 0.696   16 0.174 0.236 1.51, 4.17 1.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.3663 0.1564 1.6752 1.0574
129S1/SvImJ m 2.2069 0.1564 2.5158 1.898
A/J f 1.448 0.1564 1.7569 1.1391
A/J m 1.9891 0.1564 2.298 1.6802
C57BL/6J f 1.6061 0.1564 1.915 1.2972
C57BL/6J m 2.3466 0.1564 2.6555 2.0377
NOD/ShiLtJ f 1.7602 0.1474 2.0514 1.4689
NOD/ShiLtJ m 2.3322 0.1564 2.6411 2.0233
NZO/HlLtJ f 2.5368 0.1517 2.8364 2.2371
NZO/HlLtJ m 2.943 0.1564 3.2519 2.6341


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.7866 0.1106 2.005 1.5682
A/J both 1.7185 0.1106 1.9369 1.5001
C57BL/6J both 1.9764 0.1106 2.1948 1.758
NOD/ShiLtJ both 2.0462 0.1074 2.2584 1.8339
NZO/HlLtJ both 2.7399 0.1089 2.9551 2.5247




  GWAS USING LINEAR MIXED MODELS