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Project measure / variable:   GMC06   Glycerol

ID, description, units MPD:55512   Glycerol   glycerol (plasma, 16h fast)   [mmol/L]  
Data set, strains GMC06   inbred   5 strains     sex: both     age: 10-11wks
Procedure metabolic panel
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  STRAIN COMPARISON PLOT
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GMC06 - glycerol (plasma, 16h fast)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains5 strains
Mean of the strain means0.246   mmol/L 0.227   mmol/L
Median of the strain means0.223   mmol/L 0.223   mmol/L
SD of the strain means± 0.0415 ± 0.0334
Coefficient of variation (CV)0.169 0.147
Min–max range of strain means0.207   –   0.304   mmol/L 0.188   –   0.262   mmol/L
Mean sample size per strain16.6   mice 15.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0159 0.0159 2.9008 0.0906
strain 4 0.1726 0.0431 7.8937 < 0.0001
sex:strain 4 0.0103 0.0026 0.4722 0.7561
Residuals 152 0.8308 0.0055


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.22 0.0575   16 0.0144 0.261 0.14, 0.318 -0.62
129S1/SvImJ m 0.188 0.0382   16 0.00954 0.203 0.096, 0.233 -1.16
A/J f 0.274 0.052   16 0.013 0.19 0.184, 0.344 0.69
A/J m 0.259 0.0344   16 0.00861 0.133 0.187, 0.317 0.97
C57BL/6J f 0.207 0.0335   16 0.00837 0.162 0.164, 0.266 -0.93
C57BL/6J m 0.201 0.0401   16 0.01 0.199 0.14, 0.264 -0.77
NOD/ShiLtJ f 0.223 0.0554   18 0.0131 0.248 0.13, 0.317 -0.55
NOD/ShiLtJ m 0.223 0.0446   16 0.0112 0.2 0.15, 0.299 -0.11
NZO/HlLtJ f 0.304 0.181   17 0.044 0.596 0.179, 0.981 1.41
NZO/HlLtJ m 0.262 0.0612   15 0.0158 0.234 0.202, 0.43 1.06


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.2201 0.0185 0.2566 0.1836
129S1/SvImJ m 0.1878 0.0185 0.2243 0.1513
A/J f 0.2737 0.0185 0.3102 0.2372
A/J m 0.2586 0.0185 0.2951 0.2221
C57BL/6J f 0.2072 0.0185 0.2437 0.1707
C57BL/6J m 0.2014 0.0185 0.238 0.1649
NOD/ShiLtJ f 0.2233 0.0174 0.2578 0.1889
NOD/ShiLtJ m 0.2231 0.0185 0.2596 0.1865
NZO/HlLtJ f 0.3041 0.0179 0.3395 0.2687
NZO/HlLtJ m 0.2616 0.0191 0.2993 0.2239


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.204 0.0131 0.2298 0.1781
A/J both 0.2662 0.0131 0.292 0.2403
C57BL/6J both 0.2043 0.0131 0.2301 0.1785
NOD/ShiLtJ both 0.2232 0.0127 0.2483 0.1981
NZO/HlLtJ both 0.2829 0.0131 0.3087 0.257




  GWAS USING LINEAR MIXED MODELS