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Project measure / variable:   GMC04   bw

ID, description, units MPD:55301   bw   body weight   [g]  
Data set, strains GMC04   inbred w/CC8   8 strains     sex: both     age: 9-10wks
Procedure body weight
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  STRAIN COMPARISON PLOT
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GMC04 - body weight



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means20.8   g 25.4   g
Median of the strain means20.0   g 24.9   g
SD of the strain means± 8.98 ± 10.1
Coefficient of variation (CV)0.431 0.398
Min–max range of strain means12.9   –   41.2   g 15.8   –   47.0   g
Mean sample size per strain17.5   mice 17.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1459.5067 1459.5067 469.4716 < 0.0001
strain 7 21949.0514 3135.5788 1008.6046 < 0.0001
sex:strain 7 202.4113 28.9159 9.3012 < 0.0001
Residuals 260 808.2954 3.1088


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 20.8 1.19   16 0.299 0.0574 17.9, 23.0 0.0
129S1/SvImJ m 26.2 2.62   16 0.656 0.0999 22.6, 31.6 0.08
A/J f 20.1 1.06   16 0.264 0.0524 18.6, 22.1 -0.08
A/J m 23.6 1.03   16 0.257 0.0435 22.3, 25.7 -0.18
C57BL/6J f 19.8 1.15   16 0.289 0.0583 18.4, 21.7 -0.12
C57BL/6J m 27.2 1.56   16 0.389 0.0572 24.7, 30.0 0.18
CAST/EiJ f 12.9 0.688   19 0.158 0.0532 11.8, 14.4 -0.88
CAST/EiJ m 15.8 0.782   17 0.19 0.0494 14.3, 17.6 -0.95
NOD/ShiLtJ f 22.9 1.26   18 0.298 0.0552 20.0, 25.0 0.23
NOD/ShiLtJ m 28.9 2.53   16 0.633 0.0874 25.5, 34.4 0.35
NZO/HlLtJ f 41.2 3.18   17 0.772 0.0772 34.5, 46.8 2.27
NZO/HlLtJ m 47.0 2.78   17 0.674 0.0591 42.2, 52.8 2.14
PWK/PhJ f 14.8 1.37   20 0.307 0.0931 12.0, 16.8 -0.67
PWK/PhJ m 18.0 1.52   22 0.324 0.0844 15.4, 20.4 -0.73
WSB/EiJ f 14.2 1.92   18 0.454 0.135 11.1, 18.2 -0.74
WSB/EiJ m 16.4 1.16   16 0.289 0.0703 14.1, 18.7 -0.89


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 20.7937 0.4408 21.6617 19.9258
129S1/SvImJ m 26.2437 0.4408 27.1117 25.3758
A/J f 20.1312 0.4408 20.9992 19.2633
A/J m 23.6437 0.4408 24.5117 22.7758
C57BL/6J f 19.8 0.4408 20.668 18.932
C57BL/6J m 27.2375 0.4408 28.1055 26.3695
CAST/EiJ f 12.9474 0.4045 13.7439 12.1508
CAST/EiJ m 15.8412 0.4276 16.6832 14.9991
NOD/ShiLtJ f 22.8833 0.4156 23.7017 22.065
NOD/ShiLtJ m 28.9437 0.4408 29.8117 28.0758
NZO/HlLtJ f 41.2412 0.4276 42.0832 40.3991
NZO/HlLtJ m 47.0118 0.4276 47.8538 46.1697
PWK/PhJ f 14.76 0.3943 15.5364 13.9836
PWK/PhJ m 18.0409 0.3759 18.7811 17.3007
WSB/EiJ f 14.25 0.4156 15.0683 13.4317
WSB/EiJ m 16.4375 0.4408 17.3055 15.5695


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 23.5187 0.3117 24.1325 22.905
A/J both 21.8875 0.3117 22.5013 21.2737
C57BL/6J both 23.5187 0.3117 24.1325 22.905
CAST/EiJ both 14.3943 0.2943 14.9738 13.8147
NOD/ShiLtJ both 25.9135 0.3029 26.51 25.3171
NZO/HlLtJ both 44.1265 0.3024 44.7219 43.531
PWK/PhJ both 16.4005 0.2724 16.9368 15.8641
WSB/EiJ both 15.3437 0.3029 15.9402 14.7473




  GWAS USING LINEAR MIXED MODELS