Project measure / variable:   GMC03   cornea_reflex

ID, description, units MPD:55253   cornea_reflex   corneal reflex (0=present, 1=absent)   [score]  
Data set, strains GMC03   inbred w/CC8   8 strains     sex: both     age: 8-10wks
Procedure observation (SHIRPA)
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  STRAIN COMPARISON PLOT
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GMC03 - corneal reflex (0=present, 1=absent)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means0   score 0   score
Median of the strain means0   score 0   score
SD of the strain means± 0 ± 0
Coefficient of variation (CV)0 0
Min–max range of strain means0   –   0   score 0   –   0   score
Mean sample size per strain17.5   mice 17.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0 0.0
strain 7 0.0 0.0
sex:strain 7 0.0 0.0
Residuals 260 0.0 0.0


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   16 0.0 0.0 0.0
129S1/SvImJ m 0.0 0.0   16 0.0 0.0 0.0
A/J f 0.0 0.0   16 0.0 0.0 0.0
A/J m 0.0 0.0   16 0.0 0.0 0.0
C57BL/6J f 0.0 0.0   16 0.0 0.0 0.0
C57BL/6J m 0.0 0.0   16 0.0 0.0 0.0
CAST/EiJ f 0.0 0.0   19 0.0 0.0 0.0
CAST/EiJ m 0.0 0.0   17 0.0 0.0 0.0
NOD/ShiLtJ f 0.0 0.0   18 0.0 0.0 0.0
NOD/ShiLtJ m 0.0 0.0   16 0.0 0.0 0.0
NZO/HlLtJ f 0.0 0.0   17 0.0 0.0 0.0
NZO/HlLtJ m 0.0 0.0   17 0.0 0.0 0.0
PWK/PhJ f 0.0 0.0   20 0.0 0.0 0.0
PWK/PhJ m 0.0 0.0   22 0.0 0.0 0.0
WSB/EiJ f 0.0 0.0   18 0.0 0.0 0.0
WSB/EiJ m 0.0 0.0   16 0.0 0.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 0.0 0.0 0.0
129S1/SvImJ m 0.0 0.0 0.0 0.0
A/J f 0.0 0.0 0.0 0.0
A/J m 0.0 0.0 0.0 0.0
C57BL/6J f 0.0 0.0 0.0 0.0
C57BL/6J m 0.0 0.0 0.0 0.0
CAST/EiJ f 0.0 0.0 0.0 0.0
CAST/EiJ m 0.0 0.0 0.0 0.0
NOD/ShiLtJ f 0.0 0.0 0.0 0.0
NOD/ShiLtJ m 0.0 0.0 0.0 0.0
NZO/HlLtJ f 0.0 0.0 0.0 0.0
NZO/HlLtJ m 0.0 0.0 0.0 0.0
PWK/PhJ f 0.0 0.0 0.0 0.0
PWK/PhJ m 0.0 0.0 0.0 0.0
WSB/EiJ f 0.0 0.0 0.0 0.0
WSB/EiJ m 0.0 0.0 0.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0 0.0 0.0 0.0
A/J both 0.0 0.0 0.0 0.0
C57BL/6J both 0.0 0.0 0.0 0.0
CAST/EiJ both 0.0 0.0 0.0 0.0
NOD/ShiLtJ both 0.0 0.0 0.0 0.0
NZO/HlLtJ both 0.0 0.0 0.0 0.0
PWK/PhJ both 0.0 0.0 0.0 0.0
WSB/EiJ both 0.0 0.0 0.0 0.0




  GWAS USING LINEAR MIXED MODELS