Project measure / variable:   GMC03   gait

ID, description, units MPD:55244   gait   gait (0=fluid, 1=abnormal)   [score]  
Data set, strains GMC03   inbred w/CC8   8 strains     sex: both     age: 8-10wks
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  STRAIN COMPARISON PLOT
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GMC03 - gait (0=fluid, 1=abnormal)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means0.00625   score 0   score
Median of the strain means0   score 0   score
SD of the strain means± 0.0177 ± 0
Coefficient of variation (CV)2.83 0
Min–max range of strain means0   –   0.0500   score 0   –   0   score
Mean sample size per strain17.5   mice 17.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0035 0.0035 0.9633 0.3273
strain 7 0.0206 0.0029 0.8073 0.5818
sex:strain 7 0.0222 0.0032 0.8683 0.5321
Residuals 260 0.95 0.0037


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.0 0.0   16 0.0 0.0 -0.35
129S1/SvImJ m 0.0 0.0   16 0.0 0.0 0.0
A/J f 0.0 0.0   16 0.0 0.0 -0.35
A/J m 0.0 0.0   16 0.0 0.0 0.0
C57BL/6J f 0.0 0.0   16 0.0 0.0 -0.35
C57BL/6J m 0.0 0.0   16 0.0 0.0 0.0
CAST/EiJ f 0.0 0.0   19 0.0 0.0 -0.35
CAST/EiJ m 0.0 0.0   17 0.0 0.0 0.0
NOD/ShiLtJ f 0.0 0.0   18 0.0 0.0 -0.35
NOD/ShiLtJ m 0.0 0.0   16 0.0 0.0 0.0
NZO/HlLtJ f 0.0 0.0   17 0.0 0.0 -0.35
NZO/HlLtJ m 0.0 0.0   17 0.0 0.0 0.0
PWK/PhJ f 0.05 0.224   20 0.05 4.47 2.47
PWK/PhJ m 0.0 0.0   22 0.0 0.0 0.0
WSB/EiJ f 0.0 0.0   18 0.0 0.0 -0.35
WSB/EiJ m 0.0 0.0   16 0.0 0.0 0.0


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.0 0.0151 0.0298 -0.0298
129S1/SvImJ m 0.0 0.0151 0.0298 -0.0298
A/J f 0.0 0.0151 0.0298 -0.0298
A/J m 0.0 0.0151 0.0298 -0.0298
C57BL/6J f 0.0 0.0151 0.0298 -0.0298
C57BL/6J m 0.0 0.0151 0.0298 -0.0298
CAST/EiJ f 0.0 0.0139 0.0273 -0.0273
CAST/EiJ m 0.0 0.0147 0.0289 -0.0289
NOD/ShiLtJ f 0.0 0.0142 0.0281 -0.0281
NOD/ShiLtJ m 0.0 0.0151 0.0298 -0.0298
NZO/HlLtJ f 0.0 0.0147 0.0289 -0.0289
NZO/HlLtJ m 0.0 0.0147 0.0289 -0.0289
PWK/PhJ f 0.05 0.0135 0.0766 0.0234
PWK/PhJ m 0.0 0.0129 0.0254 -0.0254
WSB/EiJ f 0.0 0.0142 0.0281 -0.0281
WSB/EiJ m 0.0 0.0151 0.0298 -0.0298


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.0 0.0107 0.021 -0.021
A/J both 0.0 0.0107 0.021 -0.021
C57BL/6J both 0.0 0.0107 0.021 -0.021
CAST/EiJ both 0.0 0.0101 0.0199 -0.0199
NOD/ShiLtJ both 0.0 0.0104 0.0204 -0.0204
NZO/HlLtJ both 0.0 0.0104 0.0204 -0.0204
PWK/PhJ both 0.025 0.0093 0.0434 0.0066
WSB/EiJ both 0.0 0.0104 0.0204 -0.0204




  GWAS USING LINEAR MIXED MODELS