Project measure / variable:   GMC03   whiskers

ID, description, units MPD:55212   whiskers   whiskers (0=present, 1=absent)   [score]   measure
Data set, strains GMC03   inbred w/CC8   8 strains     sex: both     age: 8-10wks
Procedure observation (SHIRPA)
Ontology mappings

  STRAIN COMPARISON PLOT
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GMC03 - whiskers (0=present, 1=absent)



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested8 strains8 strains
Mean of the strain means0.125   score 0.141   score
Median of the strain means0   score 0   score
SD of the strain means± 0.354 ± 0.350
Coefficient of variation (CV)2.83 2.49
Min–max range of strain means0   –   1.00   score 0   –   1.00   score
Mean sample size per strain17.5   mice 17.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 0.0225 0.0225 3.3456 0.0685
strain 7 27.9286 3.9898 592.7701 < 0.0001
sex:strain 7 0.1105 0.0158 2.345 0.0245
Residuals 260 1.75 0.0067


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 1.0 0.0   16 0.0 0.0 1.0, 1.0 2.47
129S1/SvImJ m 1.0 0.0   16 0.0 0.0 1.0, 1.0 2.46
A/J f 0.0 0.0   16 0.0 0.0 -0.35
A/J m 0.0 0.0   16 0.0 0.0 -0.4
C57BL/6J f 0.0 0.0   16 0.0 0.0 -0.35
C57BL/6J m 0.125 0.342   16 0.0854 2.73 -0.04
CAST/EiJ f 0.0 0.0   19 0.0 0.0 -0.35
CAST/EiJ m 0.0 0.0   17 0.0 0.0 -0.4
NOD/ShiLtJ f 0.0 0.0   18 0.0 0.0 -0.35
NOD/ShiLtJ m 0.0 0.0   16 0.0 0.0 -0.4
NZO/HlLtJ f 0.0 0.0   17 0.0 0.0 -0.35
NZO/HlLtJ m 0.0 0.0   17 0.0 0.0 -0.4
PWK/PhJ f 0.0 0.0   20 0.0 0.0 -0.35
PWK/PhJ m 0.0 0.0   22 0.0 0.0 -0.4
WSB/EiJ f 0.0 0.0   18 0.0 0.0 -0.35
WSB/EiJ m 0.0 0.0   16 0.0 0.0 -0.4


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 1.0 0.0205 1.0404 0.9596
129S1/SvImJ m 1.0 0.0205 1.0404 0.9596
A/J f 0.0 0.0205 0.0404 -0.0404
A/J m 0.0 0.0205 0.0404 -0.0404
C57BL/6J f 0.0 0.0205 0.0404 -0.0404
C57BL/6J m 0.125 0.0205 0.1654 0.0846
CAST/EiJ f 0.0 0.0188 0.0371 -0.0371
CAST/EiJ m 0.0 0.0199 0.0392 -0.0392
NOD/ShiLtJ f 0.0 0.0193 0.0381 -0.0381
NOD/ShiLtJ m 0.0 0.0205 0.0404 -0.0404
NZO/HlLtJ f 0.0 0.0199 0.0392 -0.0392
NZO/HlLtJ m 0.0 0.0199 0.0392 -0.0392
PWK/PhJ f 0.0 0.0183 0.0361 -0.0361
PWK/PhJ m 0.0 0.0175 0.0344 -0.0344
WSB/EiJ f 0.0 0.0193 0.0381 -0.0381
WSB/EiJ m 0.0 0.0205 0.0404 -0.0404


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 1.0 0.0145 1.0286 0.9714
A/J both 0.0 0.0145 0.0286 -0.0286
C57BL/6J both 0.0625 0.0145 0.0911 0.0339
CAST/EiJ both 0.0 0.0137 0.027 -0.027
NOD/ShiLtJ both 0.0 0.0141 0.0278 -0.0278
NZO/HlLtJ both 0.0 0.0141 0.0277 -0.0277
PWK/PhJ both 0.0 0.0127 0.025 -0.025
WSB/EiJ both 0.0 0.0141 0.0278 -0.0278




GWAS analysis not available: At least 12 strains are required