Project measure / variable:   Dickson1   STdur_all_paired

ID, description, units MPD:54612   STdur_all_paired   sign-tracking   [s]  paired  
Data set, strains Dickson1   inbred   5 strains     sex: both     age: 12-20wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Dickson1 - sign-tracking paired



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains5 strains
Mean of the strain means0.428   s 0.896   s
Median of the strain means0.530   s 0.830   s
SD of the strain means± 0.298 ± 0.829
Coefficient of variation (CV)0.696 0.925
Min–max range of strain means0.0360   –   0.748   s 0.0380   –   1.87   s
Mean sample size per strain4.8   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 2.2059 2.2059 2.8648 0.0987
strain 4 8.9975 2.2494 2.9212 0.0335
sex:strain 4 5.9294 1.4823 1.9251 0.1261
Residuals 38 29.2608 0.77


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 0.036 0.0513   5 0.0229 1.42 -1.32
129S1/SvImJ m 0.038 0.085   5 0.038 2.24 -1.04
A/J f 0.748 0.442   5 0.198 0.591 0.38, 1.48 1.07
A/J m 0.144 0.166   5 0.0742 1.15 0.02, 0.43 -0.91
C57BL/6J f 0.203 0.232   4 0.116 1.15 0.02, 0.54 -0.76
C57BL/6J m 0.83 0.352   5 0.157 0.424 0.29, 1.25 -0.08
CAST/EiJ f 0.53 0.533   5 0.238 1.01 0.09, 1.4 0.34
CAST/EiJ m 1.87 1.72   5 0.768 0.919 0.3, 4.24 1.17
NOD/ShiLtJ f 0.624 0.98   5 0.438 1.57 0.06, 2.36 0.66
NOD/ShiLtJ m 1.6 1.91   4 0.953 1.19 0.18, 4.34 0.85


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 0.036 0.3924 0.8304 0.0
129S1/SvImJ m 0.038 0.3924 0.8324 0.0
A/J f 0.748 0.3924 1.5424 0.0
A/J m 0.144 0.3924 0.9384 0.0
C57BL/6J f 0.2025 0.4388 1.0907 0.0
C57BL/6J m 0.83 0.3924 1.6244 0.0356
CAST/EiJ f 0.53 0.3924 1.3244 0.0
CAST/EiJ m 1.868 0.3924 2.6624 1.0736
NOD/ShiLtJ f 0.624 0.3924 1.4184 0.0
NOD/ShiLtJ m 1.5975 0.4388 2.4857 0.7093


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 0.037 0.2775 0.5988 0.0
A/J both 0.446 0.2775 1.0078 0.0
C57BL/6J both 0.5163 0.2943 1.1121 0.0
CAST/EiJ both 1.199 0.2775 1.7608 0.6372
NOD/ShiLtJ both 1.1108 0.2943 1.7066 0.5149




  GWAS USING LINEAR MIXED MODELS