Project measure / variable:   Dickson1   GTdur_all_paired

ID, description, units MPD:54602   GTdur_all_paired   goal-tracking   [s]  paired  
Data set, strains Dickson1   inbred   5 strains     sex: both     age: 12-20wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Dickson1 - goal-tracking paired



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains5 strains
Mean of the strain means4.64   s 4.36   s
Median of the strain means4.63   s 4.04   s
SD of the strain means± 0.649 ± 1.22
Coefficient of variation (CV)0.140 0.281
Min–max range of strain means4.05   –   5.71   s 2.85   –   5.76   s
Mean sample size per strain4.8   mice 4.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.5552 1.5552 0.5402 0.4669
strain 4 21.3056 5.3264 1.8502 0.1394
sex:strain 4 14.8915 3.7229 1.2932 0.2899
Residuals 38 109.3955 2.8788


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 5.71 2.07   5 0.926 0.363 2.95, 8.18 1.64
129S1/SvImJ m 4.04 3.5   5 1.57 0.866 -0.26
A/J f 4.63 0.838   5 0.375 0.181 3.61, 5.49 -0.02
A/J m 5.46 0.734   5 0.328 0.134 4.62, 6.17 0.9
C57BL/6J f 4.2 0.763   4 0.381 0.182 3.78, 5.34 -0.68
C57BL/6J m 2.85 0.96   5 0.429 0.337 1.85, 4.11 -1.23
CAST/EiJ f 4.05 0.875   5 0.391 0.216 2.78, 4.98 -0.91
CAST/EiJ m 3.69 1.23   5 0.549 0.333 1.83, 5.03 -0.55
NOD/ShiLtJ f 4.63 2.17   5 0.972 0.47 1.79, 7.11 -0.02
NOD/ShiLtJ m 5.76 1.26   4 0.629 0.218 4.01, 6.86 1.14


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 5.708 0.7588 7.2441 4.1719
129S1/SvImJ m 4.044 0.7588 5.5801 2.5079
A/J f 4.626 0.7588 6.1621 3.0899
A/J m 5.458 0.7588 6.9941 3.9219
C57BL/6J f 4.1975 0.8484 5.9149 2.4801
C57BL/6J m 2.846 0.7588 4.3821 1.3099
CAST/EiJ f 4.054 0.7588 5.5901 2.5179
CAST/EiJ m 3.688 0.7588 5.2241 2.1519
NOD/ShiLtJ f 4.626 0.7588 6.1621 3.0899
NOD/ShiLtJ m 5.76 0.8484 7.4774 4.0426


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 4.876 0.5365 5.9622 3.7898
A/J both 5.042 0.5365 6.1282 3.9558
C57BL/6J both 3.5218 0.5691 4.6738 2.3697
CAST/EiJ both 3.871 0.5365 4.9572 2.7848
NOD/ShiLtJ both 5.193 0.5691 6.3451 4.0409




  GWAS USING LINEAR MIXED MODELS