Project measure / variable:   Dickson1   GTdur_all_unpaired

ID, description, units MPD:54601   GTdur_all_unpaired   goal-tracking   [s]  unpaired  
Data set, strains Dickson1   inbred   5 strains     sex: both     age: 12-20wks
Procedure operant conditioning chamber
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  STRAIN COMPARISON PLOT
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Dickson1 - goal-tracking unpaired



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested5 strains5 strains
Mean of the strain means3.26   s 3.07   s
Median of the strain means3.87   s 3.17   s
SD of the strain means± 1.02 ± 1.05
Coefficient of variation (CV)0.314 0.342
Min–max range of strain means1.64   –   4.01   s 1.45   –   4.31   s
Mean sample size per strain4.8   mice 4.6   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 1.0279 1.0279 0.2559 0.616
strain 4 37.8115 9.4529 2.3532 0.0717
sex:strain 4 2.1218 0.5304 0.1321 0.9697
Residuals 37 148.6287 4.017


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ f 3.93 3.21   5 1.43 0.816 0.16, 7.31 0.66
129S1/SvImJ m 3.17 3.39   5 1.51 1.07 0.25, 8.86 0.1
A/J f 3.87 1.89   5 0.843 0.487 0.9, 5.69 0.6
A/J m 4.31 1.54   5 0.688 0.357 1.81, 5.95 1.18
C57BL/6J f 1.64 1.25   4 0.625 0.765 0.54, 3.35 -1.58
C57BL/6J m 1.45 0.464   5 0.208 0.32 0.96, 2.03 -1.54
CAST/EiJ f 2.84 1.64   5 0.732 0.575 0.99, 4.63 -0.41
CAST/EiJ m 2.89 1.0   5 0.447 0.346 1.35, 4.05 -0.17
NOD/ShiLtJ f 4.01 1.91   5 0.854 0.476 2.12, 6.39 0.74
NOD/ShiLtJ m 3.53 1.23   3 0.71 0.348 2.15, 4.5 0.44


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ f 3.932 0.8963 5.7481 2.1159
129S1/SvImJ m 3.166 0.8963 4.9821 1.3499
A/J f 3.87 0.8963 5.6861 2.0539
A/J m 4.314 0.8963 6.1301 2.4979
C57BL/6J f 1.635 1.0021 3.6655 0.0
C57BL/6J m 1.45 0.8963 3.2661 0.0
CAST/EiJ f 2.844 0.8963 4.6601 1.0279
CAST/EiJ m 2.888 0.8963 4.7041 1.0719
NOD/ShiLtJ f 4.01 0.8963 5.8261 2.1939
NOD/ShiLtJ m 3.5333 1.1572 5.8779 1.1887


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ both 3.549 0.6338 4.8332 2.2648
A/J both 4.092 0.6338 5.3762 2.8078
C57BL/6J both 1.5425 0.6722 2.9046 0.1804
CAST/EiJ both 2.866 0.6338 4.1502 1.5818
NOD/ShiLtJ both 3.7717 0.7318 5.2545 2.2888




  GWAS USING LINEAR MIXED MODELS