Project measure / variable:   Shin1   OFT_center

ID, description, units MPD:54505   OFT_center   percent time in center for first 5 min   [%]  
Data set, strains Shin1   inbred   11 strains     sex: m     age: 12-14wks
Procedure open field test
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Shin1 - percent time in center for first 5 min



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means13.0   %
Median of the strain means13.0   %
SD of the strain means± 8.59
Coefficient of variation (CV)0.663
Min–max range of strain means0.908   –   29.8   %
Mean sample size per strain10.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 8454.9583 845.4958 9.0111 < 0.0001
Residuals 103 9664.2603 93.8278


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.8 4.57   9 1.52 2.54 -1.3
129S4/SvJaeJ m 0.908 2.53   13 0.7 2.78 -1.4
AKR/J m 13.7 10.6   10 3.36 0.777 0.09
BALB/cByJ m 12.5 12.7   9 4.24 1.02 -0.05
BTBR T+ Itpr3tf/J m 16.4 5.87   9 1.96 0.358 6.6, 22.8 0.4
C3H/HeJ m 3.61 4.53   15 1.17 1.25 -1.09
C57BL/6J m 19.6 5.78   9 1.93 0.294 11.8, 28.8 0.77
C57BL/6NTac m 29.8 15.3   11 4.62 0.514 7.0, 56.2 1.96
DBA/2J m 13.0 15.2   8 5.39 1.17 0.01
FVB/NJ m 12.0 9.6   8 3.39 0.8 0.8, 26.2 -0.11
NOD/ShiLtJ m 19.2 11.8   13 3.27 0.613 0.73


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.8 3.2288 8.2036 0.0
129S4/SvJaeJ m 0.9077 2.6865 6.2358 0.0
AKR/J m 13.66 3.0631 19.735 7.585
BALB/cByJ m 12.4667 3.2288 18.8703 6.0631
BTBR T+ Itpr3tf/J m 16.4222 3.2288 22.8258 10.0186
C3H/HeJ m 3.6133 2.501 8.5735 0.0
C57BL/6J m 19.6444 3.2288 26.0481 13.2408
C57BL/6NTac m 29.8 2.9206 35.5923 24.0077
DBA/2J m 12.975 3.4247 19.7671 6.1829
FVB/NJ m 12.0 3.4247 18.7921 5.2079
NOD/ShiLtJ m 19.2154 2.6865 24.5435 13.8873




  GWAS USING LINEAR MIXED MODELS