Phenotype measure:   Mao1   speed

ID, description, units MPD:54111   speed   speed prior to falling off of accelerating rotarod, 20 rpm/min   [n/min]
Data set, strains Mao1   CC   16 strains     sex: both     age: 10wks
Procedure rotarod
Ontology mappings

  STRAIN COMPARISON PLOT
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Mao1 - speed prior to falling off of accelerating rotarod, 20 rpm/min



  MEASURE SUMMARY
Measure Summary FemaleMale
Number of strains tested16 strains16 strains
Mean of the strain means16.5   n/min 16.1   n/min
Median of the strain means16.5   n/min 15.9   n/min
SD of the strain means± 6.04 ± 5.85
Coefficient of variation (CV)0.366 0.364
Min–max range of strain means4.33   –   30.5   n/min 8.13   –   28.4   n/min
Mean sample size per strain10.6   mice 11.8   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
sex 1 66.0047 66.0047 4.9447 0.0268
strain 15 11192.3705 746.158 55.8982 < 0.0001
sex:strain 15 261.8721 17.4581 1.3079 0.1949
Residuals 331 4418.3577 13.3485


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
CC002/UncJ f 16.7 4.09   3 2.36 0.245 12.5, 20.7 0.04
CC002/UncJ m 16.1 3.11   7 1.18 0.193 12.7, 21.3 0.0
CC008/GeniUncJ f 15.0 2.75   4 1.38 0.184 12.2, 17.7 -0.25
CC008/GeniUncJ m 17.0 3.28   5 1.47 0.192 14.2, 22.5 0.15
CC011/UncJ f 11.7 2.36   17 0.572 0.202 6.67, 16.2 -0.79
CC011/UncJ m 10.8 1.92   11 0.578 0.177 8.0, 13.5 -0.91
CC013/GeniUncJ f 13.8 2.21   6 0.904 0.16 11.3, 16.8 -0.44
CC013/GeniUncJ m 11.4 0.53   2   0.375 0.0466 11.0, 11.8 -0.8
CC019/TauUncJ f 25.4 3.51   9 1.17 0.138 22.0, 30.7 1.48
CC019/TauUncJ m 28.4 4.71   11 1.42 0.166 19.0, 35.5 2.1
CC026/GeniUncJ f 30.5 6.42   10 2.03 0.211 21.5, 39.5 2.32
CC026/GeniUncJ m 28.2 2.76   10 0.873 0.0979 24.5, 32.7 2.07
CC028/GeniUncJ f 17.7 5.46   7 2.06 0.309 12.3, 27.0 0.2
CC028/GeniUncJ m 15.7 2.88   11 0.868 0.183 10.7, 19.7 -0.07
CC032/GeniUncJ f 4.33 0.0   3 0.0 0.0 4.33, 4.33 -2.01
CC032/GeniUncJ m 8.13 1.73   24 0.353 0.213 4.67, 11.5 -1.36
CC036/UncJ f 13.4 2.62   10 0.828 0.195 9.67, 17.4 -0.51
CC036/UncJ m 14.8 4.37   10 1.38 0.296 9.0, 22.0 -0.22
CC037/TauUncJ f 17.8 4.23   19 0.971 0.237 12.8, 27.5 0.22
CC037/TauUncJ m 16.6 2.32   13 0.644 0.14 13.0, 22.0 0.09
CC038/GeniUncJ f 19.8 1.65   2   1.16 0.0831 18.7, 21.0 0.55
CC038/GeniUncJ m 18.8 5.59   9 1.86 0.298 12.2, 28.0 0.46
CC040/TauUncJ f 10.1 2.28   21 0.497 0.225 6.0, 14.0 -1.06
CC040/TauUncJ m 8.63 2.9   17 0.704 0.336 5.0, 14.0 -1.28
CC041/TauUncJ f 13.1 2.82   21 0.616 0.215 7.5, 17.3 -0.56
CC041/TauUncJ m 13.4 3.92   21 0.856 0.292 8.5, 21.3 -0.46
CC042/GeniUncJ f 18.1 4.28   14 1.14 0.237 12.5, 25.5 0.27
CC042/GeniUncJ m 17.4 3.64   15 0.94 0.209 12.3, 26.0 0.22
CC051/TauUncJ f 16.3 5.62   13 1.56 0.346 9.25, 31.0 -0.03
CC051/TauUncJ m 12.4 2.72   12 0.786 0.219 8.75, 20.0 -0.63
CC061/GeniUncJ f 20.0 4.25   13 1.18 0.212 15.0, 27.8 0.58
CC061/GeniUncJ m 19.8 5.32   13 1.47 0.268 10.0, 27.5 0.63


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ f 16.7233 2.1094 20.8728 12.5738
CC002/UncJ m 16.1143 1.3809 18.8308 13.3978
CC008/GeniUncJ f 14.98 1.8268 18.5736 11.3864
CC008/GeniUncJ m 17.034 1.6339 20.2482 13.8198
CC011/UncJ f 11.6565 0.8861 13.3996 9.9133
CC011/UncJ m 10.8364 1.1016 13.0034 8.6694
CC013/GeniUncJ f 13.8217 1.4916 16.7558 10.8875
CC013/GeniUncJ m 11.375 2.5835 16.4571 6.2929
CC019/TauUncJ f 25.4078 1.2179 27.8035 23.0121
CC019/TauUncJ m 28.3864 1.1016 30.5534 26.2194
CC026/GeniUncJ f 30.484 1.1554 32.7568 28.2112
CC026/GeniUncJ m 28.226 1.1554 30.4988 25.9532
CC028/GeniUncJ f 17.6657 1.3809 20.3822 14.9492
CC028/GeniUncJ m 15.7127 1.1016 17.8797 13.5457
CC032/GeniUncJ f 4.33 2.1094 8.4795 0.1805
CC032/GeniUncJ m 8.1254 0.7458 9.5925 6.6584
CC036/UncJ f 13.424 1.1554 15.6968 11.1512
CC036/UncJ m 14.763 1.1554 17.0358 12.4902
CC037/TauUncJ f 17.8326 0.8382 19.4815 16.1838
CC037/TauUncJ m 16.5777 1.0133 18.571 14.5843
CC038/GeniUncJ f 19.835 2.5835 24.9171 14.7529
CC038/GeniUncJ m 18.7678 1.2179 21.1635 16.3721
CC040/TauUncJ f 10.1152 0.7973 11.6836 8.5469
CC040/TauUncJ m 8.6318 0.8861 10.3749 6.8886
CC041/TauUncJ f 13.1148 0.7973 14.6831 11.5464
CC041/TauUncJ m 13.4152 0.7973 14.9836 11.8469
CC042/GeniUncJ f 18.0536 0.9765 19.9744 16.1327
CC042/GeniUncJ m 17.3887 0.9433 19.2444 15.533
CC051/TauUncJ f 16.2562 1.0133 18.2495 14.2628
CC051/TauUncJ m 12.43 1.0547 14.5047 10.3553
CC061/GeniUncJ f 19.9938 1.0133 21.9872 18.0005
CC061/GeniUncJ m 19.8269 1.0133 21.8203 17.8336


  LEAST SQUARES MEANS (MODEL-ADJUSTED), SEXES COMBINED
Strain Sex Mean SEM UpperCL LowerCL
CC002/UncJ both 16.4188 1.2606 18.8986 13.939
CC008/GeniUncJ both 16.007 1.2254 18.4176 13.5964
CC011/UncJ both 11.2464 0.7069 12.637 9.8559
CC013/GeniUncJ both 12.5983 1.4916 15.5325 9.6642
CC019/TauUncJ both 26.8971 0.8211 28.5123 25.2819
CC026/GeniUncJ both 29.355 0.817 30.9621 27.7479
CC028/GeniUncJ both 16.6892 0.8832 18.4267 14.9518
CC032/GeniUncJ both 6.2277 1.1187 8.4283 4.0271
CC036/UncJ both 14.0935 0.817 15.7006 12.4864
CC037/TauUncJ both 17.2052 0.6575 18.4986 15.9117
CC038/GeniUncJ both 19.3014 1.4281 22.1106 16.4922
CC040/TauUncJ both 9.3735 0.596 10.5459 8.2011
CC041/TauUncJ both 13.265 0.5638 14.374 12.156
CC042/GeniUncJ both 17.7211 0.6789 19.0565 16.3857
CC051/TauUncJ both 14.3431 0.7313 15.7817 12.9045
CC061/GeniUncJ both 19.9104 0.7165 21.3199 18.5009




GWAS analysis not available: Strain panel must be either Inbred, HMDP, BXD, BXH, CXB, or AXB/BXA