Project measure / variable:   Loos2   short_shelter_dur_DK

ID, description, units MPD:54081   short_shelter_dur_DK   cumulative duration of short shelter visits (sheltering) during dark phase, over 3 days of testing   [s]  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative duration of short shelter visits (sheltering) during dark phase, over 3 days of testing



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means686   s
Median of the strain means695   s
SD of the strain means± 194
Coefficient of variation (CV)0.283
Min–max range of strain means430   –   1050   s
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 15403837.9035 1540383.7903 8.5208 < 0.0001
Residuals 426 77011517.1423 180778.2093


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 442.0 445.0   59 57.9 1.01 -1.26
A/J m 773.0 514.0   43 78.4 0.666 56.9, 2318.0 0.45
BALB/cByJ m 740.0 460.0   44 69.4 0.622 105.0, 2356.0 0.28
C3H/HeJ m 430.0 279.0   29 51.8 0.648 42.2, 1247.0 -1.32
C57BL/6J m 934.0 391.0   107 37.8 0.419 241.0, 2382.0 1.28
CAST/EiJ m 725.0 533.0   14 142.0 0.735 197.0, 1868.0 0.2
DBA/2J m 532.0 316.0   39 50.6 0.594 86.8, 1202.0 -0.79
FVB/NJ m 695.0 403.0   36 67.1 0.579 62.5, 1971.0 0.05
NOD/ShiLtJ m 684.0 410.0   37 67.3 0.598 217.0, 2452.0 -0.01
PWK/PhJ m 541.0 224.0   15 57.9 0.415 234.0, 909.0 -0.75
WSB/EiJ m 1050.0 735.0   14 196.0 0.7 290.0, 3016.0 1.88


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 441.7961 55.3537 550.5965 332.9956
A/J m 772.8709 64.8394 900.3159 645.426
BALB/cByJ m 739.7932 64.0983 865.7815 613.8048
C3H/HeJ m 430.2424 78.954 585.4303 275.0545
C57BL/6J m 934.0439 41.1037 1014.8353 853.2526
CAST/EiJ m 725.2 113.6342 948.5535 501.8465
DBA/2J m 532.1449 68.0833 665.9659 398.3238
FVB/NJ m 695.1253 70.8634 834.4106 555.8399
NOD/ShiLtJ m 684.4622 69.8992 821.8524 547.0719
PWK/PhJ m 540.6333 109.7811 756.4133 324.8534
WSB/EiJ m 1050.1071 113.6342 1273.4606 826.7537




  GWAS USING LINEAR MIXED MODELS