Project measure / variable:   Loos2   short_shelter_num_LT

ID, description, units MPD:54078   short_shelter_num_LT   cumulative number of short shelter visits (sheltering), over 3 days of testing, log10 transformed   [log(n)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
Ontology mappings

  •   Or, add this measure to your collection.
       
  •     no folder
  •     put it in new folder  

  STRAIN COMPARISON PLOT
Dimensions Width:   px    Height:   px
Download Plot   
Visualization Options

Loos2 - cumulative number of short shelter visits (sheltering), over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means1.26   log(n)
Median of the strain means1.33   log(n)
SD of the strain means± 0.352
Coefficient of variation (CV)0.279
Min–max range of strain means0.547   –   1.66   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 42.2328 4.2233 27.3569 < 0.0001
Residuals 426 65.7645 0.1544


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page:
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 1.16 0.526   59 0.0684 0.452 -0.29
A/J m 1.52 0.521   43 0.0794 0.342 0.73
BALB/cByJ m 1.59 0.433   44 0.0653 0.273 0.301, 2.13 0.93
C3H/HeJ m 0.547 0.377   29 0.07 0.689 -2.03
C57BL/6J m 1.38 0.294   107 0.0285 0.214 0.301, 1.88 0.34
CAST/EiJ m 1.33 0.186   14 0.0498 0.14 1.02, 1.65 0.2
DBA/2J m 0.816 0.401   39 0.0642 0.491 -1.26
FVB/NJ m 1.61 0.279   36 0.0465 0.174 0.982, 2.32 0.99
NOD/ShiLtJ m 1.66 0.299   37 0.0492 0.181 0.602, 2.21 1.13
PWK/PhJ m 1.05 0.358   15 0.0925 0.34 -0.6
WSB/EiJ m 1.21 0.466   14 0.124 0.383 0.301, 1.76 -0.15


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.1624 0.0512 1.2629 1.0619
A/J m 1.5235 0.0599 1.6413 1.4058
BALB/cByJ m 1.5867 0.0592 1.7032 1.4703
C3H/HeJ m 0.5468 0.073 0.6902 0.4034
C57BL/6J m 1.3764 0.038 1.4511 1.3018
CAST/EiJ m 1.3306 0.105 1.537 1.1242
DBA/2J m 0.8164 0.0629 0.9401 0.6928
FVB/NJ m 1.6091 0.0655 1.7378 1.4804
NOD/ShiLtJ m 1.6563 0.0646 1.7833 1.5294
PWK/PhJ m 1.0543 0.1014 1.2537 0.8549
WSB/EiJ m 1.2144 0.105 1.4208 1.008




  GWAS USING LINEAR MIXED MODELS