Project measure / variable:   Loos2   long_shelter_threshold

ID, description, units MPD:54076   long_shelter_threshold   cut-off value to separate intermediate and long shelter visits (sheltering), over 3 days of testing   [s]  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cut-off value to separate intermediate and long shelter visits (sheltering), over 3 days of testing



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means9.85   s
Median of the strain means9.88   s
SD of the strain means± 0.457
Coefficient of variation (CV)0.0465
Min–max range of strain means9.09   –   10.5   s
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 107.5625 10.7562 16.1775 < 0.0001
Residuals 426 283.2422 0.6649


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 9.09 0.684   59 0.0891 0.0752 7.61, 10.9 -1.65
A/J m 9.16 1.12   43 0.171 0.122 4.71, 10.8 -1.5
BALB/cByJ m 9.81 0.807   44 0.122 0.0823 8.47, 11.8 -0.08
C3H/HeJ m 10.2 0.808   29 0.15 0.0793 8.65, 12.8 0.78
C57BL/6J m 10.4 0.62   107 0.06 0.0594 8.48, 12.0 1.21
CAST/EiJ m 9.88 0.673   14 0.18 0.068 8.72, 10.8 0.08
DBA/2J m 9.57 1.03   39 0.165 0.108 7.79, 13.3 -0.6
FVB/NJ m 10.1 0.781   36 0.13 0.0774 7.89, 11.5 0.56
NOD/ShiLtJ m 9.94 0.83   37 0.136 0.0835 8.29, 11.9 0.21
PWK/PhJ m 10.5 0.704   15 0.182 0.0669 9.86, 12.0 1.43
WSB/EiJ m 9.65 1.13   14 0.303 0.117 7.88, 11.7 -0.43


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 9.0947 0.1062 9.3034 8.8861
A/J m 9.1639 0.1243 9.4083 8.9194
BALB/cByJ m 9.8095 0.1229 10.0511 9.5678
C3H/HeJ m 10.1836 0.1514 10.4812 9.8859
C57BL/6J m 10.4446 0.0788 10.5995 10.2896
CAST/EiJ m 9.8841 0.2179 10.3124 9.4557
DBA/2J m 9.5683 0.1306 9.8249 9.3116
FVB/NJ m 10.0871 0.1359 10.3543 9.82
NOD/ShiLtJ m 9.936 0.1341 10.1995 9.6725
PWK/PhJ m 10.5167 0.2105 10.9306 10.1029
WSB/EiJ m 9.6535 0.2179 10.0818 9.2252




  GWAS USING LINEAR MIXED MODELS