Project measure / variable:   Loos2   long_shelter_fraction

ID, description, units MPD:54075   long_shelter_fraction   fraction of shelter visits (sheltering) with duration longer than long shelter visit threshold, over 3 days of testing, log10 transformed   [log(ratio)]  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - fraction of shelter visits (sheltering) with duration longer than long shelter visit threshold, over 3 days of testing, log10 transformed

C3H/HeJ129S1/SvImJDBA/2JCAST/EiJWSB/EiJFVB/NJPWK/PhJC57BL/6JNOD/ShiLtJA/JBALB/cByJ log(ratio) 0.000.020.040.060.080.100.120.140.160.18femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means0.0337   log(ratio)
Median of the strain means0.0258   log(ratio)
SD of the strain means± 0.0279
Coefficient of variation (CV)0.826
Min–max range of strain means0.00694   –   0.109   log(ratio)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 0.2591 0.0259 106.9752 < 0.0001
Residuals 426 0.1032 0.0002


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 11 (11)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 0.0489 0.0238   59 0.0031 0.487 0.017, 0.136 0.54
A/J m 0.0115 0.00465   43 0.000709 0.406 0.000434, 0.0204 -0.8
BALB/cByJ m 0.00694 0.00362   44 0.000545 0.521 0.000434, 0.0175 -0.96
C3H/HeJ m 0.109 0.0318   29 0.00591 0.291 0.0625, 0.177 2.7
C57BL/6J m 0.0235 0.00937   107 0.000906 0.4 0.00752, 0.0719 -0.37
CAST/EiJ m 0.0272 0.00845   14 0.00226 0.311 0.0161, 0.0452 -0.23
DBA/2J m 0.0462 0.022   39 0.00352 0.476 0.00784, 0.111 0.45
FVB/NJ m 0.0258 0.0112   36 0.00186 0.433 0.00989, 0.0539 -0.28
NOD/ShiLtJ m 0.0211 0.0104   37 0.00171 0.491 0.00232, 0.064 -0.45
PWK/PhJ m 0.0246 0.00964   15 0.00249 0.392 0.0109, 0.0432 -0.33
WSB/EiJ m 0.0264 0.0132   14 0.00352 0.499 0.0128, 0.0613 -0.26


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.0489 0.002 0.0529 0.0449
A/J m 0.0115 0.0024 0.0161 0.0068
BALB/cByJ m 0.0069 0.0023 0.0116 0.0023
C3H/HeJ m 0.1093 0.0029 0.115 0.1036
C57BL/6J m 0.0235 0.0015 0.0264 0.0205
CAST/EiJ m 0.0272 0.0042 0.0353 0.019
DBA/2J m 0.0462 0.0025 0.0511 0.0413
FVB/NJ m 0.0258 0.0026 0.0309 0.0207
NOD/ShiLtJ m 0.0211 0.0026 0.0261 0.0161
PWK/PhJ m 0.0246 0.004 0.0325 0.0167
WSB/EiJ m 0.0264 0.0042 0.0346 0.0182




  GWAS USING LINEAR MIXED MODELS

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