Project measure / variable:   Loos2   long_shelter_dur_DK

ID, description, units MPD:54073   long_shelter_dur_DK   cumulative duration of long shelter visits (sheltering), over 3 days of testing   [s]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
Ontology mappings

  STRAIN COMPARISON PLOT
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Loos2 - cumulative duration of long shelter visits (sheltering), over 3 days of testing during dark phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means17241   s
Median of the strain means16103   s
SD of the strain means± 5438
Coefficient of variation (CV)0.315
Min–max range of strain means6898   –   25906   s
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 9421816750.1295 942181675.0129 33.9735 < 0.0001
Residuals 426 11814203275.572 27732871.5389


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
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Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 24962.0 5903.0   59 769.0 0.236 11654.0, 34061.0 1.42
A/J m 16666.0 5194.0   43 792.0 0.312 5370.0, 28965.0 -0.11
BALB/cByJ m 15243.0 4096.0   44 617.0 0.269 6416.0, 23135.0 -0.37
C3H/HeJ m 21790.0 5080.0   29 943.0 0.233 8768.0, 30414.0 0.84
C57BL/6J m 15191.0 5133.0   107 496.0 0.338 91.0, 25880.0 -0.38
CAST/EiJ m 18706.0 2889.0   14 772.0 0.154 12441.0, 24029.0 0.27
DBA/2J m 16103.0 5945.0   39 952.0 0.369 -0.21
FVB/NJ m 25906.0 4537.0   36 756.0 0.175 14530.0, 35195.0 1.59
NOD/ShiLtJ m 14972.0 6962.0   37 1145.0 0.465 213.0, 28114.0 -0.42
PWK/PhJ m 6898.0 2106.0   15 544.0 0.305 3038.0, 10841.0 -1.9
WSB/EiJ m 13217.0 5845.0   14 1562.0 0.442 -0.74


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 24962.2186 685.601 26309.8004 23614.6369
A/J m 16665.9256 803.0881 18244.434 15087.4171
BALB/cByJ m 15242.65 793.9097 16803.1178 13682.1822
C3H/HeJ m 21790.3069 977.909 23712.4342 19868.1796
C57BL/6J m 15190.9454 509.1029 16191.6117 14190.2792
CAST/EiJ m 18706.3643 1407.4514 21472.7779 15939.9506
DBA/2J m 16103.4821 843.267 17760.9641 14446.0
FVB/NJ m 25906.125 877.7001 27631.287 24180.963
NOD/ShiLtJ m 14971.7919 865.7581 16673.4812 13270.1026
PWK/PhJ m 6897.86 1359.7272 9570.4695 4225.2505
WSB/EiJ m 13217.1714 1407.4514 15983.5851 10450.7578




  GWAS USING LINEAR MIXED MODELS