Project measure / variable:   Loos2   long_shelter_num_LT

ID, description, units MPD:54072   long_shelter_num_LT   cumulative number of long shelter visits (sheltering), over 3 days of testing, log10 transformed   [log(n)]  during light phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative number of long shelter visits (sheltering), over 3 days of testing, log10 transformed during light phase

NOD/ShiLtJFVB/NJWSB/EiJC57BL/6JCAST/EiJPWK/PhJ129S1/SvImJBALB/cByJC3H/HeJA/JDBA/2J log(n) 0.00.20.40.60.81.01.21.4femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means0.766   log(n)
Median of the strain means0.762   log(n)
SD of the strain means± 0.0849
Coefficient of variation (CV)0.111
Min–max range of strain means0.625   –   0.877   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 2.7743 0.2774 18.9474 < 0.0001
Residuals 426 6.2376 0.0146


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 11 (11)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 0.726 0.111   59 0.0145 0.153 0.477, 0.964 -0.47
A/J m 0.665 0.178   43 0.0271 0.267 0.041, 1.03 -1.18
BALB/cByJ m 0.72 0.0831   44 0.0125 0.115 0.602, 0.914 -0.54
C3H/HeJ m 0.706 0.127   29 0.0235 0.179 0.477, 1.06 -0.7
C57BL/6J m 0.821 0.0881   107 0.00852 0.107 0.505, 1.09 0.65
CAST/EiJ m 0.795 0.121   14 0.0324 0.152 0.477, 1.01 0.35
DBA/2J m 0.625 0.142   39 0.0227 0.227 0.301, 0.857 -1.66
FVB/NJ m 0.868 0.118   36 0.0197 0.136 0.699, 1.09 1.21
NOD/ShiLtJ m 0.877 0.113   37 0.0186 0.129 0.602, 1.06 1.31
PWK/PhJ m 0.762 0.0907   15 0.0234 0.119 0.602, 0.914 -0.04
WSB/EiJ m 0.856 0.216   14 0.0578 0.253 0.623, 1.49 1.07


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.7255 0.0158 0.7565 0.6946
A/J m 0.665 0.0185 0.7013 0.6288
BALB/cByJ m 0.7198 0.0182 0.7556 0.6839
C3H/HeJ m 0.7058 0.0225 0.7499 0.6616
C57BL/6J m 0.8206 0.0117 0.8436 0.7976
CAST/EiJ m 0.7955 0.0323 0.8591 0.7319
DBA/2J m 0.6254 0.0194 0.6635 0.5873
FVB/NJ m 0.8678 0.0202 0.9075 0.8282
NOD/ShiLtJ m 0.8767 0.0199 0.9158 0.8376
PWK/PhJ m 0.7618 0.0312 0.8232 0.7003
WSB/EiJ m 0.8557 0.0323 0.9193 0.7922




  GWAS USING LINEAR MIXED MODELS

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