Project measure / variable:   Loos2   long_shelter_num_DK

ID, description, units MPD:54071   long_shelter_num_DK   cumulative number of long shelter visits (sheltering), over 3 days of testing, log10 transformed   [log(n)]  during dark phase  
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
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  STRAIN COMPARISON PLOT
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Loos2 - cumulative number of long shelter visits (sheltering), over 3 days of testing, log10 transformed during dark phase

129S1/SvImJDBA/2JWSB/EiJA/JFVB/NJNOD/ShiLtJC3H/HeJC57BL/6JCAST/EiJBALB/cByJPWK/PhJ log(n) 0.00.20.40.60.81.01.21.41.61.82.0femalemale


  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means0.804   log(n)
Median of the strain means0.823   log(n)
SD of the strain means± 0.148
Coefficient of variation (CV)0.184
Min–max range of strain means0.473   –   1.03   log(n)
Mean sample size per strain35.1   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 6.4924 0.6492 14.6587 < 0.0001
Residuals 426 18.8678 0.0443


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
  
Select table page: 1 - 10 / 11 (11)
Strain
Sex
Mean
SD
N mice
SEM
CV
Min, Max
Z score
129S1/SvImJ m 1.03 0.184   59 0.024 0.179 0.477, 1.37 1.53
A/J m 0.858 0.236   43 0.036 0.275 0.602, 2.01 0.36
BALB/cByJ m 0.66 0.135   44 0.0204 0.205 0.477, 1.02 -0.97
C3H/HeJ m 0.814 0.188   29 0.0348 0.23 0.477, 1.13 0.07
C57BL/6J m 0.772 0.182   107 0.0176 0.235 -0.22
CAST/EiJ m 0.727 0.0815   14 0.0218 0.112 0.602, 0.914 -0.52
DBA/2J m 0.929 0.313   39 0.0502 0.337 0.84
FVB/NJ m 0.854 0.142   36 0.0237 0.167 0.477, 1.12 0.34
NOD/ShiLtJ m 0.823 0.296   37 0.0487 0.36 0.13
PWK/PhJ m 0.473 0.1   15 0.0258 0.212 0.301, 0.623 -2.23
WSB/EiJ m 0.903 0.336   14 0.0899 0.373 0.67


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 1.0273 0.0274 1.0812 0.9734
A/J m 0.8576 0.0321 0.9207 0.7945
BALB/cByJ m 0.6604 0.0317 0.7228 0.5981
C3H/HeJ m 0.8138 0.0391 0.8906 0.737
C57BL/6J m 0.7717 0.0203 0.8117 0.7317
CAST/EiJ m 0.7274 0.0562 0.8379 0.6168
DBA/2J m 0.9291 0.0337 0.9953 0.8629
FVB/NJ m 0.8538 0.0351 0.9227 0.7848
NOD/ShiLtJ m 0.8229 0.0346 0.8909 0.7549
PWK/PhJ m 0.4726 0.0543 0.5794 0.3658
WSB/EiJ m 0.9026 0.0562 1.0132 0.7921




  GWAS USING LINEAR MIXED MODELS

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