Phenotype measure:   Loos2   short_arrest_dur_mean_LT

ID, description, units MPD:54068   short_arrest_dur_mean_LT   mean duration per short arrest, over 3 days of testing, log10 transformed   [log(s)]  during light phase
Data set, strains Loos2   inbred w/CC7   11 strains     sex: m     age: 8-12wks
Procedure home cage monitoring
Ontology mappings

  STRAIN COMPARISON PLOT
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Loos2 - mean duration per short arrest, over 3 days of testing, log10 transformed during light phase



  MEASURE SUMMARY
Measure Summary Male
Number of strains tested11 strains
Mean of the strain means0.311   log(s)
Median of the strain means0.306   log(s)
SD of the strain means± 0.0362
Coefficient of variation (CV)0.117
Min–max range of strain means0.263   –   0.373   log(s)
Mean sample size per strain35.0   mice


  ANOVA, Q-Q NORMALITY ASSESSMENT
ANOVA summary      
FactorDFSum of squaresMean sum of squaresF valuep value (Pr>F)
strain 10 0.4013 0.0401 27.0787 < 0.0001
Residuals 425 0.6298 0.0015


Q-Q normality assessment based on residuals

  


  STRAIN MEANS (UNADJUSTED)
Strain Sex Mean SD N mice SEM CV Min, Max Z score
129S1/SvImJ m 0.283 0.0478   59 0.00623 0.169 0.213, 0.467 -0.76
A/J m 0.298 0.0356   42 0.00549 0.119 0.225, 0.391 -0.35
BALB/cByJ m 0.263 0.0328   44 0.00494 0.125 0.213, 0.39 -1.32
C3H/HeJ m 0.341 0.0351   29 0.00651 0.103 0.294, 0.422 0.84
C57BL/6J m 0.306 0.0334   107 0.00323 0.109 0.243, 0.401 -0.13
CAST/EiJ m 0.322 0.0341   14 0.0091 0.106 0.27, 0.39 0.31
DBA/2J m 0.358 0.0553   39 0.00885 0.154 0.269, 0.548 1.31
FVB/NJ m 0.319 0.0366   36 0.0061 0.115 0.225, 0.388 0.23
NOD/ShiLtJ m 0.263 0.023   37 0.00378 0.0874 0.22, 0.315 -1.32
PWK/PhJ m 0.373 0.0426   15 0.011 0.114 0.31, 0.467 1.72
WSB/EiJ m 0.291 0.0429   14 0.0115 0.147 0.238, 0.409 -0.54


  LEAST SQUARES MEANS (MODEL-ADJUSTED)
Strain Sex Mean SEM UpperCL LowerCL
129S1/SvImJ m 0.2833 0.005 0.2931 0.2734
A/J m 0.2982 0.0059 0.3099 0.2865
BALB/cByJ m 0.2632 0.0058 0.2746 0.2518
C3H/HeJ m 0.3406 0.0071 0.3547 0.3266
C57BL/6J m 0.3059 0.0037 0.3132 0.2986
CAST/EiJ m 0.322 0.0103 0.3422 0.3018
DBA/2J m 0.3584 0.0062 0.3705 0.3462
FVB/NJ m 0.3185 0.0064 0.3312 0.3059
NOD/ShiLtJ m 0.2633 0.0063 0.2757 0.2508
PWK/PhJ m 0.3729 0.0099 0.3924 0.3533
WSB/EiJ m 0.2911 0.0103 0.3113 0.2709




GWAS analysis not available: At least 12 strains are required